MétaCan
Menu
Back to cohort
Record W2130071233 · doi:10.1001/archneurol.2011.53

Genetic and Clinical Features of Progranulin-Associated Frontotemporal Lobar Degeneration

2011· article· en· W2130071233 on OpenAlexafffund
Alice Chen‐Plotkin, Maria Martinez‐Lage, Patrick Sleiman, William T. Hu, Robert A. Greene, Elisabeth McCarty Wood, Shaoxu Bing, Murray Grossman, Kimmo J. Hatanpaa, Myron Weiner, Charles L. White, William S. Brooks, Glenda M. Halliday, Jillian J. Kril, Marla Gearing, Thomas G. Beach, Neill R. Graff‐Radford, Dennis W. Dickson, Rosa Rademakers, Bradley F. Boeve, Stuart Pickering‐Brown, Julie S. Snowden, John C. van Swieten, Peter Heutink, Harro Seelaar, Jill R. Murrell, Bernardino Ghetti, Salvatore Spina, Jordan Grafman, Jeffrey Kaye, Randall L. Woltjer, Marsel Mesulam, Eileen H. Bigio, Albert Lladó, Bruce L. Miller, Ainhoa Alzualde, Fermín Moreno, Jonathan D. Rohrer, Ian R. Mackenzie, Howard Feldman, Ronald L. Hamilton, Marc Cruts, Sebastiaan Engelborghs, Peter Paul De Deyn, Christine Van Broeckhoven, Thomas D. Bird, Nigel J. Cairns, Matthew P. Frosch, Peter Riederer, Nenad Bogdanović, Virginia M.‐Y. Lee, John Q. Trojanowski, Vivianna M. Van Deerlin

Bibliographic record

VenueArchives of Neurology · 2011
Typearticle
Languageen
FieldMedicine
TopicAmyotrophic Lateral Sclerosis Research
Canadian institutionsUniversity of British Columbia
FundersNational Institute on AgingNational Health and Medical Research CouncilMedical Research CouncilCanadian Institutes of Health ResearchArizona Biomedical Research CommissionVlaamse regeringNational Center for Research ResourcesFonds Wetenschappelijk OnderzoekDeutsche ForschungsgemeinschaftBelgian Federal Science Policy OfficeEusko JaurlaritzaArizona Department of Health ServicesWellcome TrustNational Institute of Neurological Disorders and StrokeBundesministerium für Bildung und ForschungBijzonder Onderzoeksfonds UGentNational Institutes of HealthUniversiteit AntwerpenU.S. Department of Veterans Affairs
KeywordsFrontotemporal lobar degenerationFrontotemporal dementiaMutationPathologyHaplotypeMedicineBiologyDiseaseGeneticsDementiaGeneAllele

Abstract

fetched live from OpenAlex

OBJECTIVE: To assess the relative frequency of unique mutations and their associated characteristics in 97 individuals with mutations in progranulin (GRN), an important cause of frontotemporal lobar degeneration (FTLD). PARTICIPANTS AND DESIGN: A 46-site International Frontotemporal Lobar Degeneration Collaboration was formed to collect cases of FTLD with TAR DNA-binding protein of 43-kDa (TDP-43)-positive inclusions (FTLD-TDP). We identified 97 individuals with FTLD-TDP with pathogenic GRN mutations (GRN+ FTLD-TDP), assessed their genetic and clinical characteristics, and compared them with 453 patients with FTLD-TDP in which GRN mutations were excluded (GRN- FTLD-TDP). No patients were known to be related. Neuropathologic characteristics were confirmed as FTLD-TDP in 79 of the 97 GRN+ FTLD-TDP cases and all of the GRN- FTLD-TDP cases. RESULTS: Age at onset of FTLD was younger in patients with GRN+ FTLD-TDP vs GRN- FTLD-TDP (median, 58.0 vs 61.0 years; P < .001), as was age at death (median, 65.5 vs 69.0 years; P < .001). Concomitant motor neuron disease was much less common in GRN+ FTLD-TDP vs GRN- FTLD-TDP (5.4% vs 26.3%; P < .001). Fifty different GRN mutations were observed, including 2 novel mutations: c.139delG (p.D47TfsX7) and c.378C>A (p.C126X). The 2 most common GRN mutations were c.1477C>T (p.R493X, found in 18 patients, representing 18.6% of GRN cases) and c.26C>A (p.A9D, found in 6 patients, representing 6.2% of cases). Patients with the c.1477C>T mutation shared a haplotype on chromosome 17; clinically, they resembled patients with other GRN mutations. Patients with the c.26C>A mutation appeared to have a younger age at onset of FTLD and at death and more parkinsonian features than those with other GRN mutations. CONCLUSION: GRN+ FTLD-TDP differs in key features from GRN- FTLD-TDP.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.043
Threshold uncertainty score0.269

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.316
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations121
Published2011
Admission routes2
Has abstractyes

Explore more

Same venueArchives of NeurologySame topicAmyotrophic Lateral Sclerosis ResearchFrench-language works237,207