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Pathotype Classification of <i>Plasmodiophora brassicae</i> and its Occurrence in <i>Brassica napus</i> in Alberta, Canada

2007· article· en· W2132494353 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueJournal of Phytopathology · 2007
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Disease Resistance and Genetics
Canadian institutionsAgriculture Food and Rural DevelopmentUniversity of Alberta
Fundersnot available
KeywordsClubrootBiologyCanolaBrassicaAgronomyVeterinary medicineHorticultureBotany

Abstract

fetched live from OpenAlex

Abstract A field survey for clubroot of crucifers, caused by Plasmodiophora brassicae , was conducted in the regions surrounding Edmonton, Alberta, Canada, in 2005. The presence of clubroot was confirmed in 41 of the 112 canola ( Brassica napus ) fields surveyed. These P. brassicae ‐ infested fields were located in Sturgeon, Strathcona, Leduc and Wetaskiwin counties, as well as in a rural area of northeast Edmonton. Infected roots were also received from an infested field in Flagstaff County, southeast of Edmonton. Although there was a significant negative correlation between index of disease and soil pH, the occurrence of clubroot was not restricted to fields with acidic soils. Populations of the pathogen were selected from 10 fields and used in pathotype classification on the differential hosts of Williams, Somé et al. and the European Clubroot Differential (ECD) set. Kruskal–Wallis analysis indicated no significant differences in the virulence of the 10 populations tested, suggesting that they are relatively homogenous. If a disease index of 50% was regarded as the cut‐off between a resistant and a susceptible reaction, then all P. brassicae populations tested were classified as ECD ‐/15/12 on the hosts of the ECD set, or as pathotypes 3 or P2 on the differentials of Williams or Somé et al. respectively. However, it may be difficult to detect rare or infrequent pathotypes when field populations of the pathogen are used for characterization.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.701
Threshold uncertainty score0.726

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.217
Teacher spread0.206 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it