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Record W2133408403 · doi:10.1111/pbi.12168

Simultaneous over‐expressing of an acyl‐<scp>ACP</scp> thioesterase (<scp>F</scp>at<scp>B</scp>) and silencing of acyl‐acyl carrier protein desaturase by artificial micro<scp>RNA</scp>s increases saturated fatty acid levels in <scp><i>B</i></scp><i>rassica napus</i> seeds

2014· article· en· W2133408403 on OpenAlexaff
Jinyue Sun, Joe K. Hammerlindl, Li Forseille, Haixia Zhang, Mark Smith

Bibliographic record

VenuePlant Biotechnology Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsNational Research Council CanadaSaskatchewan Research Council (Canada)
Fundersnot available
KeywordsBiologyBrassicaFatty acidPalmitic acidAcyl carrier proteinStearic acidThioesteraseSaturated fatty acidBiochemistryGlucosinolateGeneOleic acidPeroxisomeGene expressionBotanyBiosynthesisChemistry

Abstract

fetched live from OpenAlex

Summary No temperate oilseeds crops are available that produce oil with a high saturated fatty acid content. To achieve such a profile, Brassica napus cv. DH12075 was engineered by simultaneous seed‐specific over‐expression of a native fatty acyl‐ACP thioesterase B [BnFatB(2)] and artificial microRNA‐mediated down‐regulation of eight endogenous genes encoding putative stearoyl‐ACP desaturases (BnSADs). Semi‐quantitative RT‐PCR analysis of transformed lines showed that the BnFatB(2) gene was highly over‐expressed and the eight putative SAD genes were strongly down‐regulated in developing seed demonstrating the successful application of microRNA as a tool for down‐regulation of genes in the allotetraploid plant B. napus. Analysis of seed triacylglycerol (TAG) composition revealed that all lines contained high levels of palmitic acid (16:0) and moderately increased levels of stearic acid (18:0). Total saturated fatty acid content was increased from 7.4% in the control to 37.3–45.6% in the transformed lines, with FatB over‐expression as the dominant trait. A twofold increase in 16:0 was observed in seed polar lipids. The melting point of oil from mature seeds was increased from −10 °C in DH12075 to 15 °C in the line with the highest saturated fatty acid content. TAG composition showed a shift from predominantly C54 TAG to C50 and C52 TAGs enriched in palmitic acid. Seedling establishment at low temperature was compromised in lines with high saturated fatty acid content. Results suggested that transcript encoding stearoyl‐ACP desaturase in developing B. napus seeds is present in considerable excess of the level required for efficient desaturation of 18:0.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.213
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2014
Admission routes1
Has abstractyes

Explore more

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