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Matrix metalloproteinase‐2 is localized to the mitochondria‐associated membrane in the heart (1154.4)

2014· article· en· W2135712850 on OpenAlexafffundabout
Bryan Hughes, Frank Fan, Woo Jung Cho, Richard Schulz

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtease and Inhibitor Mechanisms
Canadian institutionsUniversity of Alberta
FundersCanadian Institutes of Health Research
KeywordsMitochondrionEndoplasmic reticulumMatrix metalloproteinaseCell biologyChaperone (clinical)Mitochondrial matrixImmunogold labellingColocalizationBiologyInner membraneSubcellular localizationInner mitochondrial membraneCalnexinBiochemistryChemistryCytosolCalreticulinEnzymePathologyUltrastructureCytoplasmAnatomyMedicine

Abstract

fetched live from OpenAlex

Intracellular matrix metalloproteinase‐2 (MMP‐2) is activated by pro‐oxidants to proteolyze intercellular targets. MMP‐2 has recently been reported in mitochondria, a critical source of cellular oxidative stress. However, the methods used to determine MMP‐2 subcellular localization could not differentiate between MMP‐2 in the mitochondria or the mitochondrial‐associated membrane (MAM), a subdomain of the endoplasmic reticulum (ER). We hypothesized that mitochondrial MMP‐2 may be situated in the MAM and therefore investigated the subcellular distribution of MMP‐2. Immunogold electron microscopy revealed MMP‐2 in mitochondria of heart sections from mice. However, HaloTagged MMP‐2 expressed in HL‐1 cardiomyocytes showed an ER‐like distribution with greater colocalization with an ER marker (protein disulfide isomerase) relative to a mitochondrial marker, MitoTracker Red. Although MMP‐2 protein and enzymatic activity were present in crude mitochondrial fractions, once these were separated into purified mitochondria and MAM, MMP‐2 was principally associated with the latter. We also found that calreticulin, an ER and MAM‐resident Ca2+ handling protein and chaperone, could be proteolyzed by MMP‐2 in vitro. Thus, although mitochondria may contain minimal levels of MMP‐2, the majority of MMP‐2 previously identified as “mitochondrial” is in fact associated with the MAM. We hypothesize that MAM‐localized MMP‐2 could affect mitochondrial function by affecting ER‐mitochondrial Ca2+ signaling. Grant Funding Source : Supported by the Canadian Institutes of Health Research

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.248
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes3
Has abstractyes

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