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Record W2136043357 · doi:10.1242/jeb.014225

The role of proline in the elastic mechanism of hydrated spider silks

2008· article· en· W2136043357 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Experimental Biology · 2008
Typearticle
Languageen
FieldMaterials Science
TopicSilk-based biomaterials and applications
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsSILKElasticity (physics)Spider silkProlineMaterials scienceRubber elasticityElastic energyEntropy (arrow of time)BiophysicsChemistryChemical physicsNatural rubberThermodynamicsAmino acidComposite materialBiochemistryPhysicsBiology

Abstract

fetched live from OpenAlex

This study used thermoelastic measurements to investigate the role of proline in the elastic mechanism of hydrated, spider major ampullate (MA) and flagelliform (FL) silks. Experiments on hydrated MA silk from Araneus diadematus (proline content 16%) reveal that conformational entropy elasticity accounts for about 90% of the elastic force at small extensions, but entropy elasticity drops to about half by 50% extension. The decrease in the entropic component with extension is due to the presence of relatively short and conformationally restricted network chains in Araneus MA silk. Experiments on hydrated Araneus FL silk (proline content 16%) indicate that entropy elasticity dominates the elastic mechanism up to extensions of 100% and beyond, which likely reflects the fact that the glycine-rich network chains in FL silk are longer and less conformationally restricted than those in the MA silk. Thus, the rubber-like, entropic elasticity of these two proline-rich silks is consistent with networks of amorphous chains that become mobile when hydrated. By contrast, the elastic mechanism of hydrated Nephila clavipes MA silk (proline content 3.5%) shows a small contribution from entropic elasticity for extensions of 5% or less, and by 10% extension the elastic force is due entirely to bond-energy elasticity, probably associated with the deformation of stable secondary structures. These results indicate that there are major differences in the structural organization of the glycine-rich network chains and the mechanism of elasticity in proline-rich and proline-deficient fibroins.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.143

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.283
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it