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Record W2136043357 · doi:10.1242/jeb.014225

The role of proline in the elastic mechanism of hydrated spider silks

2008· article· en· W2136043357 on OpenAlexaff
K. Savage, John M. Gosline

Bibliographic record

VenueJournal of Experimental Biology · 2008
Typearticle
Languageen
FieldMaterials Science
TopicSilk-based biomaterials and applications
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsSILKElasticity (physics)Spider silkProlineMaterials scienceRubber elasticityElastic energyEntropy (arrow of time)BiophysicsChemistryChemical physicsNatural rubberThermodynamicsAmino acidComposite materialBiochemistryPhysicsBiology

Abstract

fetched live from OpenAlex

This study used thermoelastic measurements to investigate the role of proline in the elastic mechanism of hydrated, spider major ampullate (MA) and flagelliform (FL) silks. Experiments on hydrated MA silk from Araneus diadematus (proline content 16%) reveal that conformational entropy elasticity accounts for about 90% of the elastic force at small extensions, but entropy elasticity drops to about half by 50% extension. The decrease in the entropic component with extension is due to the presence of relatively short and conformationally restricted network chains in Araneus MA silk. Experiments on hydrated Araneus FL silk (proline content 16%) indicate that entropy elasticity dominates the elastic mechanism up to extensions of 100% and beyond, which likely reflects the fact that the glycine-rich network chains in FL silk are longer and less conformationally restricted than those in the MA silk. Thus, the rubber-like, entropic elasticity of these two proline-rich silks is consistent with networks of amorphous chains that become mobile when hydrated. By contrast, the elastic mechanism of hydrated Nephila clavipes MA silk (proline content 3.5%) shows a small contribution from entropic elasticity for extensions of 5% or less, and by 10% extension the elastic force is due entirely to bond-energy elasticity, probably associated with the deformation of stable secondary structures. These results indicate that there are major differences in the structural organization of the glycine-rich network chains and the mechanism of elasticity in proline-rich and proline-deficient fibroins.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.000
Threshold uncertainty score0.001

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.283
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations92
Published2008
Admission routes1
Has abstractyes

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