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Record W2136354175 · doi:10.1139/z2012-040

Molecular phylogeny of<i>Gyrodactylus</i>(Monogenea) parasitizing fishes in fresh water, estuarine, and marine habitats in Canada

2012· article· en· W2136354175 on OpenAlexaffvenueabout
Scott R. Gilmore, David K. Cone, Geoffrey J Lowe, Sue King, Simon R. M. Jones, Cathryn L. Abbott

Bibliographic record

VenueCanadian Journal of Zoology · 2012
Typearticle
Languageen
FieldEnvironmental Science
TopicParasite Biology and Host Interactions
Canadian institutionsDalhousie UniversityFisheries and Oceans CanadaSaint Mary's University
Fundersnot available
KeywordsGyrodactylusMonogeneaBiologyZoologyGenusTaxonomy (biology)PhylogeneticsEcologyEvolutionary biologyFish <Actinopterygii>FisheryGenetics

Abstract

fetched live from OpenAlex

Gyrodactylus Nordmann, 1832 is a genus of monogenean flatworms that is well-studied in Europe and best known for the destructive pathogen of Atlantic salmon, Gyrodactylus salaris Malmberg, 1957. However, there is a paucity of information on species of Gyrodactylus occurring elsewhere despite that the genus is thought to be extremely speciose. Here we present the first major molecular phylogeny of Gyrodactylus using samples from host fishes in North America. Our aims were to characterize species and molecular diversity of North American Gyrodactylus to allow a determination of their evolutionary relationship with congenerics sampled from Europe. Specimens belonging to 25 species of Gyrodactylus and closely related species from Canada and the northern United States of America were identified using morphology and sequenced at 18S rDNA and ITS2 rDNA (totaling ca. 1430 bp). Significant molecular groups in North American Gyrodactylus were found to correspond to a major division in the genus based on the structure of the male copulatory organ. Results corroborate earlier findings suggesting that the genus Fundulotrema Kritsky and Thatcher, 1977, traditionally thought to be distinct from Gyrodactylus owing to the presence of a peduncular bar, falls within Gyrodactylus. The usefulness and application of the broadly conserved 18S primers as a standard tool for Gyrodactylus taxonomy is discussed and advocated.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score0.588

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.233
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations42
Published2012
Admission routes3
Has abstractyes

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