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Record W2142647237 · doi:10.1017/s0024282909008111

Genetically divergent algae shape an epiphytic lichen community on Jack Pine in Manitoba

2009· article· en· W2142647237 on OpenAlexaffabout
Matthew Doering, Michele D. Piercey‐Normore

Bibliographic record

VenueThe Lichenologist · 2009
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsLichenBiologyAlgaeBiological dispersalEpiphyteInternal transcribed spacerBotanyGene flowEcologyHabitatRibosomal DNARibosomal RNAPhylogeneticsGenetic variationGenePopulationGenetics

Abstract

fetched live from OpenAlex

Abstract Algal genotypes should freely associate with different lichen fungi that grow in the same confined habitat giving the appearance of low levels of selectivity and specificity. If genetic compatibility between algal and fungal partners limits the combination of partners, then some degree of taxonomic specificity should be evident. This study examined the photobiont composition in a community of epiphytic lichens on Jack Pine to investigate selectivity and specificity. The objectives of the study were to infer algal identity, to infer photobiont dispersal, and to investigate the distribution of algal genotypes relative to the fungal partner. Photobiont variability was determined by Restriction Fragment Length Polymorphism (RFLP) and nucleotide sequences of the Internal Transcribed Spacer (ITS) of ribosomal DNA (rDNA). Seven species of lichen-forming fungi are reported to associate with five divergent algal genotypes, with only one species,Evernia mesomorpha, showing some degree of selectivity and specificity. The algae represent at least two species (Trebouxia jamesiiandT. impressa) for the area confined to 200cm2on the north side of 20 Jack Pine trees. Gene flow was inferred in this tightly defined community of lichenized algae. The algal sharing and inferred gene flow may suggest that soredia provide a means of algal transport and distribution among lichen-forming fungi in the habitat.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.921
Threshold uncertainty score0.156

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.059
GPT teacher head0.252
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2009
Admission routes2
Has abstractyes

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