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Record W2142998788

Recent human ventricular cell action potential models under varied ischaemic conditions

2013· article· en· W2142998788 on OpenAlexaff
Sara Dutta, Ana Mincholé, T. Alexander Quinn, Blanca Rodríguez

Bibliographic record

VenueComputing in Cardiology Conference · 2013
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsDalhousie University
Fundersnot available
KeywordsIschemiaExtracellularCardiologyRefractory periodInternal medicineBridging (networking)ChemistryMedicineBiophysicsComputer scienceBiologyBiochemistry
DOInot available

Abstract

fetched live from OpenAlex

Investigating arrhythmic mechanisms during ischaemia is essential to improve clinical therapy. However, experimental data in human is scarce. Computational models are an essential tool for bridging this gap. Recent human ventricular cell action potential (AP) models have been built with data from healthy cells, thus their applicability to studies of ischaemia is mostly unknown. We have carried out a simulation study in single cell and tissue under normal and varied ischaemic conditions using 4 recent human models: ten Tusscher et al. 2006 (TP06), Grandi et al. 2010 (GPB), Carro et al. 2011 (CRLP), and O'hara et al. 2011 (ORd). We varied two parameters that play an important role in arrhythmogenesis during ischaemia: extracellular potassium concentration ([K+]o) and peak conductance of the ATP-sensitive inward-rectifying potassium current (IK(ATP)). To assess the applicability of these models to simulate ischaemia, we calculated AP duration (APD) and post-repolarisation refractoriness (PRR), biomarkers of arrhythmic risk. Results show that all models displayed the expected APD shortening due to IK(ATP) activation and hyperkalaemia. Furthermore, all models, apart from the ORd, reproduced an increase in PRR. The GPB did not show propagation of excitation for [K+]o=9mM. This study suggests that the CRLP and TP06 models are the most suitable for performing human-specific simulations of arrhythmogenesis during myocardial ischaemia.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.291
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2013
Admission routes1
Has abstractyes

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