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Record W2147451728 · doi:10.1111/1365-2745.12091

Do plant traits retrieved from a database accurately predict on‐site measurements?

2013· article· en· W2147451728 on OpenAlexfundno aff
Verena Cordlandwehr, Rebecca L. Meredith, W.A. Ozinga, Renée M. Bekker, J.M. van Groenendael, Jan P. Bakker

Bibliographic record

VenueJournal of Ecology · 2013
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsnot available
FundersEuropean Science FoundationEuropean CommissionCarl von Ossietzky Universität OldenburgMcGill University
KeywordsHabitatDatabaseTraitCanopySpecific leaf areaEcologyPlant communityScale (ratio)Salt marshBiologyEnvironmental scienceGeographyCartographyEcological successionComputer scienceBotany

Abstract

fetched live from OpenAlex

Summary Trait‐based approaches are increasingly used to obtain an insight into the functional aspects of plant communities. Since measuring traits can be time‐consuming, large international databases of plant traits are being compiled to share the effort. From these databases, average trait values are often extracted per species by averaging trait values of individuals over multiple populations and habitats. However, the accuracy of such aggregated information from regional databases as a surrogate for on‐site measurements has seldom been tested. For the local species pool (aggregated at the habitat‐level) and the plant communities on the plots (aggregated at the community‐level), we quantified how accurately trait values for each species measured at the plot (plot scale) and those averaged per species and site (site scale) can be estimated from those retrieved from a North‐west‐European trait database. We analysed three widely used plant traits, canopy height ( CH ), leaf dry matter content ( LDMC ) and specific leaf area ( SLA ), of species occurring in a wet meadow and a salt marsh. Database values more accurately predicted traits aggregated at the habitat‐level than those aggregated at the community‐level. In addition, traits with lower plasticity, such as LDMC , were more accurately predicted by database values. The performance of database values also depended upon the habitat studied, for example, habitat‐level SLA values were accurately predicted by database values in the wet meadow but inaccurately predicted in the salt marsh. Synthesis . This study reveals that the accuracy of traits retrieved from a database depends on the level of aggregation (lower at community‐level), the trait (lower in plastic traits) and the habitat type (lower in extreme habitats). For studies focussing on processes mainly acting at the site scale (e.g. trait–environment relationships), traits retrieved from a regional database and filtered according to habitat will probably lead to good results. Whereas studying processes acting at the plot scale (e.g. niche partitioning), requires the additional effort of measuring traits on‐site.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.265
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations120
Published2013
Admission routes1
Has abstractyes

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