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Record W2150047536 · doi:10.3906/biy-1204-50

Concentration of sodium dodecyl sulfate used in occlusion body extraction affects Spodoptera littoralis nucleopolyhedrovirus biological activity

2013· article· en· W2150047536 on OpenAlexfundno aff
Hilal Susurluk, Umut Toprak, Mehmet Gürkan

Bibliographic record

VenueTURKISH JOURNAL OF BIOLOGY · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicViral Infectious Diseases and Gene Expression in Insects
Canadian institutionsnot available
FundersAgriculture and Agri-Food Canada
KeywordsSpodoptera littoralisSodium dodecyl sulfateBiologyBiological activityNoctuidaeLepidoptera genitaliaBaculoviridaeBiological pest controlInstarLarvaSodiumExtraction (chemistry)MicrobiologySpodopteraChromatographyBotanyBiochemistryIn vitroChemistryRecombinant DNA

Abstract

fetched live from OpenAlex

Efficacy of a baculovirus as a biological control agent is evaluated according to biological parameters, median lethal dose (LD_{50}) of the virus, and median lethal time (LT_{50}) of infected larvae. Sodium dodecyl sulfate (SDS) is commonly used in concentrations of 0.1%-1% to extract infective units of the baculoviruses, occlusion bodies (OBs), from infected cadavers. Although several studies have shown disruption of OB structure by SDS, the effects of SDS concentrations on baculovirus biological parameters are not well known. Indeed, it is essential to detect the optimum SDS concentration for OB extraction to compare the activity of baculoviruses accurately. In our study, the effects of SDS (0.1%-2%) on baculoviral biological activity were examined using Spodoptera littoralis nucleopolyhedrovirus in third instar Spodoptera littoralis (Lepidoptera: Noctuidae) larvae. Use of 1% SDS in OB extraction caused the lowest LD_{50}, while higher concentrations than 1% significantly increased the LD_{50}. The differences between LT_{50} values at 0.1%-1% SDS were found to be insignificant; however, higher concentrations (>1.0%) caused significant loss of biological activity. Therefore, 0.1%-1.0% SDS could be used for OB extraction; however, evaluation of LD_{50} and LT_{50} values together suggests that 1% SDS provides the best biological activity. The mode of action of SDS on baculovirus biological activity is discussed further.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.078
Threshold uncertainty score0.542

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.292
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2013
Admission routes1
Has abstractyes

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