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Record W2165136213 · doi:10.18632/oncotarget.6129

Targeting mitochondrial RNA polymerase in acute myeloid leukemia

2015· article· en· W2165136213 on OpenAlexafffundabout
Fernando N. Bralha, Sanduni U. Liyanage, Rose Hurren, Xiaoming Wang, Meong Hi Son, Thomas A. Fung, Francine B. Chingcuanco, Aveline Y. W. Tung, Ana C. Andreazza, Pamela Psarianos, Aaron D. Schimmer, Leonardo Salmena, Rebecca R. Laposa

Bibliographic record

VenueOncotarget · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsCentre for Addiction and Mental HealthUniversity Health NetworkPrincess Margaret Cancer CentreUniversity of Toronto
FundersUniversity of TorontoStem Cell NetworkNatural Sciences and Engineering Research Council of CanadaBroad Institute
KeywordsGene knockdownOxidative phosphorylationMitochondrionBiologyMyeloid leukemiaMolecular biologyCancer researchNRF1Mitochondrial biogenesisCell biologyApoptosisBiochemistry

Abstract

fetched live from OpenAlex

// Fernando N. Bralha 1 , Sanduni U. Liyanage 2 , Rose Hurren 2 , Xiaoming Wang 2 , Meong Hi Son 1,2 , Thomas A. Fung 1 , Francine B. Chingcuanco 1 , Aveline Y. W. Tung 1 , Ana C. Andreazza 1,3,4 , Pamela Psarianos 1 , Aaron D. Schimmer 2 , Leonardo Salmena 1,2 and Rebecca R. Laposa 1 1 Department of Pharmacology and Toxicology, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada 2 Princess Margaret Cancer Centre, University Health Network, Toronto, Canada 3 Department of Psychiatry, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada 4 Centre for Addiction and Mental Health, Toronto, Ontario, Canada Correspondence to: Rebecca R. Laposa, email: // Keywords : acute myeloid leukemia, mitochondria, mitochondrial RNA polymerase, electron transport chain, oxidative phosphorylation Received : August 27, 2015 Accepted : September 25, 2015 Published : October 15, 2015 Abstract Acute myeloid leukemia (AML) cells have high oxidative phosphorylation and mitochondrial mass and low respiratory chain spare reserve capacity. We reasoned that targeting the mitochondrial RNA polymerase (POLRMT), which indirectly controls oxidative phosphorylation, represents a therapeutic strategy for AML. POLRMT-knockdown OCI-AML2 cells exhibited decreased mitochondrial gene expression, decreased levels of assembled complex I, decreased levels of mitochondrially-encoded Cox-II and decreased oxidative phosphorylation. POLRMT-knockdown cells exhibited an increase in complex II of the electron transport chain, a complex comprised entirely of subunits encoded by nuclear genes, and POLRMT-knockdown cells were resistant to a complex II inhibitor theonyltrifluoroacetone. POLRMT-knockdown cells showed a prominent increase in cell death. Treatment of OCI-AML2 cells with 10-50 µM 2- C -methyladenosine (2-CM), a chain terminator of mitochondrial transcription , reduced mitochondrial gene expression and oxidative phosphorylation, and increased cell death in a concentration-dependent manner. Treatment of normal human hematopoietic cells with 2-CM at concentrations of up to 100 µMdid not alter clonogenic growth, suggesting a therapeutic window. In an OCI-AML2 xenograft model, treatment with 2-CM (70 mg/kg, i.p., daily) decreased the volume and mass of tumours to half that of vehicle controls. 2-CM did not cause toxicity to major organs. Overall, our results in a preclinical model contribute to the functional validation of the utility of targeting the mitochondrial RNA polymerase as a therapeutic strategy for AML.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.614
Threshold uncertainty score0.795

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.257
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations44
Published2015
Admission routes3
Has abstractyes

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