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Record W2167283992 · doi:10.1093/jac/dkq133

Identification of a blaVIM-4 gene in the internationally successful Klebsiella pneumoniae ST11 clone and in a Klebsiella oxytoca strain in Hungary

2010· letter· en· W2167283992 on OpenAlexaboutno aff
Katalin Kristóf, Ákos Tóth, Ivelina Damjanova, Laura Jánvári, Marianne Konkoly-Thege, Béla Kocsis, R. Koncan, Giuseppe Cornaglia, Eszter Szegő, K. Nagy, Dóra Szabó

Bibliographic record

VenueJournal of Antimicrobial Chemotherapy · 2010
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAntibiotic Resistance in Bacteria
Canadian institutionsnot available
Fundersnot available
KeywordsEscherichia coliclone (Java method)Klebsiella pneumoniaeMicrobiologyMultilocus sequence typingBiologyKlebsiella oxytocaVirulenceGeneGeneticsGenotype

Abstract

fetched live from OpenAlex

Sir, The VIM-type metallo-β-lactamases (MBLs) have been detected worldwide in Pseudomonas aeruginosa and Acinetobacter spp., and, more recently, in many species of Enterobacteriaceae. After the first detection of VIM-4 in P. aeruginosa in Greece in 2001,1 these strains were isolated in many countries, including Hungary, where VIM-4- producing P. aeruginosa and Aeromonas hydrophila were reported.2,3 In Hungarian clinical microbiological laboratories, the screening for presumptive carbapenemase producers is performed according to Hungarian guidelines, which are based on the CLSI recommendations.4 The putative production of MBLs is tested by the modified Hodge test, and disc tests containing imipenem and/or ceftazidime either alone or combined with EDTA. In 2009, 5% of Klebsiella spp. (1.4% of Enterobacteriaceae) isolates from the BP1 centre and 4.76% of Klebsiella spp. (2.4% of Enterobacteriaceae) isolates from the BP2 centre were ertapenem-resistant non-carbapenemase producers. No imipenem or meropenem non-susceptible strains were isolated during this year. Based on screening and confirmatory tests, one carbapenem-susceptible Klebsiella pneumoniae strain (KP3686) isolated from bronchoalveolar lavage (BP1 centre, February 2009) and one carbapenem-susceptible Klebsiella oxytoca strain (KO5294/9) isolated from stool (BP2 centre, July 2009) proved to be MBL producers. The aim of our study was to characterize the first Hungarian MBL-producing K. pneumoniae KP3686 and K. oxytoca KO5294/9 isolates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.014
Threshold uncertainty score0.029

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.245
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations35
Published2010
Admission routes1
Has abstractyes

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