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A spatially explicit method for evaluating accuracy of species distribution models

2010· article· en· W2170164498 on OpenAlexafffundabout
Mary Smulders, Trisalyn Nelson, Dennis E. Jelinski, Scott E. Nielsen, Gordon B. Stenhouse

Bibliographic record

VenueDiversity and Distributions · 2010
Typearticle
Languageen
FieldEnvironmental Science
TopicWildlife Ecology and Conservation
Canadian institutionsFoothills Medical CentreUniversity of AlbertaUniversity of Victoria
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsCategorical variableUrsusSpatial analysisProbabilistic logicStatisticsSpecies distributionStatistical modelEcologyGeographyEnvironmental scienceHabitatComputer scienceCartographyMathematicsPopulation

Abstract

fetched live from OpenAlex

Abstract Aim Models predicting the spatial distribution of animals are increasingly used in wildlife management and conservation planning. There is growing recognition that common methods of evaluating species distribution model (SDM) accuracy, as a global overall value of predictive ability, could be enhanced by spatially evaluating the model thereby identifying local areas of relative predictive strength and weakness. Current methods of spatial SDM model assessment focus on applying local measures of spatial autocorrelation to SDM residuals, which require quantitative model outputs. However, SDM outputs are often probabilistic (relative probability of species occurrence) or categorical (species present or absent). The goal of this paper was to develop a new method, using a conditional randomization technique, which can be applied to directly spatially evaluate probabilistic and categorical SDMs. Location Eastern slopes, Rocky Mountains, Alberta, Canada. Methods We used predictions from seasonal grizzly bear ( Ursus arctos ) resource selection functions (RSF) models to demonstrate our spatial evaluation technique. Local test statistics computed from bear telemetry locations were used to identify areas where bears were located more frequently than predicted. We evaluated the spatial pattern of model inaccuracies using a measure of spatial autocorrelation, local Moran’s I . Results We found the model to have non‐stationary patterns in accuracy, with clusters of inaccuracies located in central habitat areas. Model inaccuracies varied seasonally, with the summer model performing the best and the least error in areas with high RSF values. The landscape characteristics associated with model inaccuracies were examined, and possible factors contributing to RSF error were identified. Main conclusions The presented method complements existing spatial approaches to model error assessment as it can be used with probabilistic and categorical model output, which is typical for SDMs. We recommend that SDM accuracy assessments be done spatially and resulting accuracy maps included in model metadata.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.359
Threshold uncertainty score0.791

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.293
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2010
Admission routes3
Has abstractyes

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