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Record W2170845649 · doi:10.4319/lo.2007.52.5.2270

Coupled changes in the cell morphology and elemental (C, N, and Si) composition of the pennate diatom Pseudo‐nitzschia due to iron deficiency

2007· article· en· W2170845649 on OpenAlexafffund
Adrian Marchetti, Paul J. Harrison

Bibliographic record

VenueLimnology and Oceanography · 2007
Typearticle
Languageen
FieldMaterials Science
TopicDiatoms and Algae Research
Canadian institutionsUniversity of British Columbia
FundersDivision of Ocean SciencesUniversity of British ColumbiaUniversity of Washington
KeywordsDiatomCellNitzschiaBiologyCell wallComposition (language)Morphology (biology)BotanyChlorophyllAlgaeAnimal scienceNutrientPhytoplanktonEcologyBiochemistryZoology

Abstract

fetched live from OpenAlex

We investigated the changes in cell morphology and elemental composition with varying iron nutritional status in four oceanic and two coastal isolates of the marine pennate diatom Pseudo‐nitzschia. When iron‐deficient, most isolates exhibited slower specific growth rates (m), reduced maximum photochemical yields (WM), and lower chlorophyll a (Chl a) contents than iron‐replete cultures. Iron‐deficient cells exhibited reduced cell volumes, primarily as the result of decreased valve transapical widths, which increased the valve aspect ratios. The increase in aspect ratios varied among isolates and was not correlated with the degree of growth limitation due to irondeficiency. In all Pseudo‐nitzschia isolates, the mean carbon (Ccell), nitrogen (Ncell), and silicon (Sicell) cell quotas of iron‐deficient cells decreased when compared to iron‐replete cells. Similarly, in five out of the six isolates, the mean C and N quotas normalized per unit cell volume (Cvol and Nvol) of iron‐deficient cells also decreased, but by a lesser extent. In contrast, there were no clear differences in the changes in the mean Si quotas normalized per unit cell surface area (Sisa). The Sicell:Ncell and Sicell : Ccell ratios (quotas normalized per cell) of iron‐deficient cells increased compared to iron‐replete conditions due to greater reductions in C and N cell quotas compared to Si cell quotas. This increase in the Sicell:Ncell ratio was proportional to the changes in the valve aspect ratios. Our results show that iron‐deficient Pseudo‐nitzschia cells acclimate to low iron concentrations by increasing their valve aspect ratios, thus reducing their cell volumes and increasing their surface area‐to‐volume (SA : V) ratios. These changes in cell morphology increase the Si‐containing valve surface area relative to the volume of the internal components, which may then influence the cellular elemental composition, in particular, the Si :N and Si :C ratios.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.245
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations109
Published2007
Admission routes2
Has abstractyes

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