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Record W2171896686 · doi:10.1139/b10-020

γ-Aminobutyrate transaminase limits the catabolism of γ-aminobutyrate in cold-stressed <i>Arabidopsis</i> plants: insights from an overexpression mutant

2010· article· en· W2171896686 on OpenAlex
Jeffrey P. Simpson, Shawn M. Clark, Andrea Portt, Wendy L. Allan, Amina Makhmoudova, Amanda Rochon, Barry J. Shelp

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
venuePublished in a venue whose home country is Canada.

Bibliographic record

VenueBotany · 2010
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicGABA and Rice Research
Canadian institutionsUniversity of Guelph
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyGABA transaminaseCatabolismArabidopsisGlyoxylate cycleBiochemistryMutantTransformation (genetics)EnzymeReductaseDehydrogenaseBiosynthesisTransgeneGeneGlutamate decarboxylase

Abstract

fetched live from OpenAlex

We tested the hypothesis that γ-aminobutyrate transaminase (GABA-T) regulates the supply of succinate semialdehyde for succinate semialdehyde dehydrogenase or NADPH-dependent glyoxylate/succinate semialdehyde reductase 1 (GLYR1) during stress. Constitutive overexpression (OX) lines of GABA-T were generated in Arabidopsis via the floral-dip method for Agrobacterium-mediated transformation. Polymerase chain reaction enabled selection of four transgenic lines with higher GABA-T transcript levels than the wild-type (WT), but assay of cell-free leaf extracts revealed that only OX1 had elevated GABA-T activity. Brief cold treatments (4 °C exposure for 20 min or 1 h in the dark) increased leaf GABA concentrations in both the WT and OX1, but the concentrations in OX1 were consistently lower. These findings confirm that GABA-T limits the catabolism of GABA when its production is stimulated by stress, and suggest a bioengineering strategy for improving the availability of succinate semialdehyde for the Krebs cycle or GLYR1, a potential redox-modulating reaction during stress.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.485
Threshold uncertainty score0.611

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.244
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Quick stats

Citations19
Published2010
Admission routes3
Has abstractyes

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