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A molecular phylogenetic analysis of the grasshopper genus Melanoplus Stål (Orthoptera: Acrididae) – an update

2002· article· sv· W2172024364 on OpenAlexafffund
W. Chapco, G. Litzenberger

Bibliographic record

VenueJournal of Orthoptera Research · 2002
Typearticle
Languagesv
FieldAgricultural and Biological Sciences
TopicOrthoptera Research and Taxonomy
Canadian institutionsUniversity of Regina
FundersNatural Sciences and Engineering Research Council of CanadaMcGill University
KeywordsBiologyPhylogenetic treeGrasshopperAcrididaeGenusCladeTaxonZoologyMaximum parsimonyLineage (genetic)Evolutionary biologyBotanyEcologyOrthopteraGeneticsGene

Abstract

fetched live from OpenAlex

This research expands upon our previous molecular phylogenetic analysis of the genus Melanoplus by incorporating additional mitochondrial genes, taxa and specimens. Included are two monotypic genera suspected of close affiliation with Melanoplus Phoetaliotes and Bohemanella. Portions of four mitochondrial genes, coding for cytochrome b, cytochrome oxidase subunits I and II, and NADH dehydrogenase subunit II, were sequenced and phylogenetically analyzed using (weighted and unweighted) parsimony and neighbor-joining methods. Maximum resolution of relationships was achieved using weighted parsimony and by treating all sequences, totaling 1716 base pairs, as a unit.The following large clades emerged in parsimony analyses, supported by moderate to poor bootstrap values: A — sanguinipes, femurrubrum, devastator, gaspesiensis, fasciatus, borealis, madeleineae, dawsoni; B — packardii, foedus, angustipennis, gladstoni, aspasmus; C — bivittatus, franciscanus, keeleri, calidus, littoralis, differentialis; D — infantilis, alpinus, aridus, Phoetaliotes, scudderi; and E — confusus, Bohemanella, marginatus, microtatus. M. lakinus was basal to all species. Deviations from the conventional literature in which species are organized into species groups or series are discussed. It is concluded that many such groups are phylogenetically questionable; their validity warrants serious reconsideration.Two phenomena - a rapid burst (or bursts) of speciation occurring early in the genus' evolution and an absence of complete lineage sorting for certain closely related species - are nicely illustrated by Melanoplus. We provide evidence that the massive radiation that took place within the past 4 My, inferred previously by Knowles and Otte, extends to a wider base of taxa, beyond the particular species studied by these authors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.074
GPT teacher head0.316
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2002
Admission routes2
Has abstractyes

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