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Molecular phylogenetic evidence for multiple dispersal events in gomphocerine grasshoppers

2006· article· en· W2174203064 on OpenAlexaff
Daniel Contreras, W. Chapco

Bibliographic record

VenueJournal of Orthoptera Research · 2006
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicOrthoptera Research and Taxonomy
Canadian institutionsUniversity of Regina
FundersRussian Academy of SciencesAkdeniz ÜniversitesiCentre de Coopération Internationale en Recherche Agronomique pour le DéveloppementUniversidad de GranadaAcademia SinicaUniversity of WyomingUniversity of Florida
KeywordsBiologyMonophylyBiological dispersalPhylogenetic treeSubfamilyMaximum parsimonyEvolutionary biologyParaphylyZoologyCladeGeneticsGenePopulationDemography

Abstract

fetched live from OpenAlex

The gomphocerine grasshoppers, comprising over 1000 species, occur on all continents excepting Australia and Madagascar. This work provides an independent examination of previous accounts of their taxonomic relationships and intercontinental connections, focusing on selected North American and Eurasian taxa. Our study is based on portions of four mitochondrial genes (coding for cytochrome b, cytochrome oxidase subunits I and II, and NADH dehydrogenase subunit V) which were sequenced and phylogenetically analyzed using weighted and unweighted maximum parsimony, maximum likelihood and Bayesian methods. Maximum resolution was achieved using weighted parsimony (counting transversions at third codon positions only) and Bayesian methods, and treating all four sequences, totalling 1892 bp, as a unit. The subfamily is provisionally accepted as monophyletic. The tribe Chrysochraontini is monophyletic, whereas the monophyletic status of Aulocarini and Dociostaurini is unclear. Tribes, Arcypterini, Chorthippini and Gomphocerini, are not monophyletic and require further scrutiny. Regarding biogeographic origins of the subfamily, our molecular data generally support Vickery's assertion that there were multiple periods of dispersal, most likely from Eurasia to North America. Assigning the range 50 to 70 Mya to the time of gomphocerine divergence, we provide estimates of the times of these biogeographic events.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.113
GPT teacher head0.358
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations31
Published2006
Admission routes1
Has abstractyes

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