MétaCan
Menu
Back to cohort
Record W2180123303 · doi:10.4141/cjps2012-312

Identification of cotton <i>SKP</i>1-like gene <i>GhSKP1</i> and its function in seed germination and taproot growth in tobacco

2013· article· en· W2180123303 on OpenAlex
De-Long Hu, Quan-Zhan Chen, Chaojun Zhang, Ye Wang, Canming Tang

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCanadian Journal of Plant Science · 2013
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicResearch in Cotton Cultivation
Canadian institutionsnot available
Fundersnot available
KeywordsTaprootSkp1BiologyComplementary DNAGerminationF-box proteinBotanyUbiquitin ligaseGeneGeneticsUbiquitin

Abstract

fetched live from OpenAlex

Hu, D-L., Chen, Q-Z., Zhang, C-J., Wang, Y., Zhang, B-J. and Tang, C-M. 2013. Identification of cotton SKP 1-like gene GhSKP1 and its function in seed germination and taproot growth in tobacco. Can. J. Plant Sci. 93: 817–825. The SKP1 (S-phase kinase-associated-protein1) protein, a key component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, has been reported to play many important roles in many organisms, including regulation of ubiquitin-mediated protein degradation, seed germination, taproot growth and auxin signaling, though no study of this gene in cotton has been performed. In this study, a SKP1 gene was isolated from upland cotton (Gossypium hirsutum L.) using the rapid amplification of cDNA ends (RACE) method and was named Gossypium hirsutum SKP1 (GhSKP1). The cDNA sequence of GhSKP1 was 813 bp containing a 474 bp open reading frame, encoding a protein of 156 amino acids with a predicted molecular weight of 17.63 kDa. The deduced amino acid of GhSKP1 had a conserved SKP1 domain. GhSKP1 expression was tested in all organs of cotton plants, and the strongest expression was observed in stamens and radicles that have actively dividing cells. Overexpression of the full-length GhSKP1 cDNA in tobacco caused delayed seed germination and shortened taproots. Our results suggest that the presence of functional conservation between GhSKP1 and SKP1 in plant developmental processes may exist.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.781
Threshold uncertainty score0.994

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.220
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it