MétaCan
Menu
Back to cohort
Record W2235455239

Genetic Variation Among Different Indian Populations of Cabbage Diamondback Moth ( Plutella xylostella ; Lepidoptera: Plutellidae) Based on Mitochondrial DNA

2016· article· en· W2235455239 on OpenAlex
Rakshit Ojha, S. K. Jalali, J. Poorani, K. Srinivasa Murthy

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueMolecular Entomology · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInsect Resistance and Genetics
Canadian institutionsnot available
Fundersnot available
KeywordsPlutellaBiologyDiamondback mothGenetic variationPlutellidaeMitochondrial DNAHaplotypePhylogenetic treeDNA barcodingGeneticsLepidoptera genitaliaZoologyEcologyGeneGenotype
DOInot available

Abstract

fetched live from OpenAlex

Plutella xylostella (L.), commonly known as diamondback moth, is one of the most widely distributed and serious pests of cruciferous crops across the world. To examine the pattern and magnitude of genetic variation in this species in India, a fragment of the mitochondrial (mt) Cytochrome C oxidase subunit I ( COXI ) gene of P. xylostella collected from thirteen provinces in India, spanning a geographic area of ~ 12250000 km 2 , was sequenced. Sequence analysis of the 658 bp mt COXI gene from 13 populations resulted in 9 haplotypes, of which 5 populations clustered to form a haplotype group. Among these populations, 11 polymorphic sites were observed, of which 5 were transitional and 6 were of transversional substitution. Phylogenetic analysis in comparison with nucleotide sequences of other countries obtained from GenBank showed that all the populations were highly interrelated. From a geographical perspective, high rates of migration between Indian populations suggest that dispersal of gene flow over considerable distances is a major factor in the development of genetic variability in the species. Nevertheless, we believe that these variations are induced by local selection pressure in insecticide usage, host strain variation and cultural practices. Our study has revealed that Indian populations of P. xylostella are not homogeneous and use of DNA barcoding with more suitable markers can resolve the issues related to the demography of the species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.046
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.226
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it