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Mammalian acetyl‐CoA carboxylase polymerizes in association with tubulin

2008· article· en· W2266885838 on OpenAlexaffabout
Weissy Michele Lee, Roger W. Brownsey

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPeroxisome Proliferator-Activated Receptors
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsPyruvate carboxylaseAllosteric regulationTubulinBiochemistryPhosphorylationMicrotubuleChemistryFatty acid synthaseFatty acidAcetyl-CoA carboxylaseEnzymeBiologyCell biology

Abstract

fetched live from OpenAlex

Acetyl‐CoA carboxylase (ACC) catalyses the formation of malonyl‐CoA, an essential substrate for fatty acid synthase and a potent inhibitor of fatty acid oxidation. Control of ACC activity has important implications for overall energy metabolism and involves complex regulation via gene expression, allosteric mechanisms and multi‐site phosphorylation. A classic characteristic of ACC is allosteric activation by carboxylic acids, leading to the formation of filamentous polymers (up to 5–10‐MDa). Here, we test the hypothesis that ACC polymerization involves additional proteins. ACC polymers were purified by size fractionation and subjected to tandem mass spectrometry to identify associated proteins. Major ACC polymer‐associated proteins included tubulin and fatty acid synthase. The association between ACC and tubulin was validated by co‐immunoprecipitation and confocal microscopy. In reconstitution studies, purified tubulin and/or GTP had no direct effect on catalytic properties of ACC. However, based on immunocytochemical analysis, association with tubulin may be sensitive to the phosphorylation state of ACC. In conclusion, intracellular control of ACC involves complex protein‐protein interactions. These studies were supported by the Canadian Institutes for Health Research and by Scholarships from UBC and the Natural Sciences and Engineering Research Council (WML).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.214
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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