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Stimulating innate immunity in feedlot cattle: strategies to induce tracheal antimicrobial peptide gene expression

2013· article· en· W2268389490 on OpenAlexaff
Lesley Berghuis, Jeff Caswell, Shayan Sharif, Neil A. Karrow

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicAntimicrobial Peptides and Activities
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsInnate immune systemBiologyLipopolysaccharideReceptorToll-like receptorStimulationBovine respiratory diseaseAntimicrobial peptidesBeta defensinTLR4Gene expressionSignal transductionCell biologyImmunologyImmune systemMicrobiologyGeneEndocrinologyAntimicrobialBiochemistry

Abstract

fetched live from OpenAlex

Bovine respiratory disease (BRD) is an economically devastating complex of bacterial and viral infections that greatly affects the feedlot industry across North America. Studies have shown that viral infections such as BVDV and glucocorticoid production in stressed calves may inhibit the induction of tracheal antimicrobial peptide (TAP), a cationic β‐defensin that has direct microbicidal effects on invading microbes in the respiratory tract. Certain surface receptors of the innate immune system called the Toll‐Like‐Receptors (TLRs) recognize pathogen associated molecular patterns (PAMPs) to initiate intracellular signal transduction pathways that potentially induce TAP gene expression. PCR analyses of unstimulated tracheal epithelial cells show mRNA expression for TLRs 1,2,3,4, and 6. Therefore, stimulation of tracheal epithelial cells with agonists for these TLRs may induce TAP expression. Previous studies have shown that a TLR 4 agonist called Lipopolysaccharide (LPS) significantly induces TAP expression in epithelial cells after 16 hours of stimulation. This suggests that LPS induces TAP expression via the TLR 4 pathway. The present study examines TLR 2 agonists to determine their effect on TAP induction. Quantitative Real‐Time PCR analysis of epithelial cells stimulated by the TLR 2 agonist Lipoteichoic Acid has shown significant induction of TAP. However, the amount of induction is much less than LPS and occurs after the same amount of stimulation time. Future experiments will determine if other TLR 2 agonists can induce gene expression of TAP in a robust and rapid manner so that TAP production can be increased to ultimately reduce the incidence of BRD in feedlot calves.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.253
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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