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Record W2274580454 · doi:10.2527/jas.2014-8107

Some novel growth functions and their application with reference to growth in ostrich1

2015· article· en· W2274580454 on OpenAlexafffund
A. Faridi, Secundino López, H. Ammar, K. Salwa, Abolghasem Golian, J. H. M. Thornley, J. France

Bibliographic record

VenueJournal of Animal Science · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversity of Guelph
FundersCanada Research Chairs
KeywordsBiology

Abstract

fetched live from OpenAlex

Four novel growth functions, namely, Pareto, extreme value distribution (EVD), Lomolino, and cumulative β-P distribution (CBP), are derived, and their ability to describe ostrich growth curves is evaluated. The functions were compared with standard growth equations, namely, the monomolecular, Michaelis-Menten (MM), Gompertz, Richards, and generalized MM (gMM). For this purpose, 2 separate comparisons were conducted. In the first, all the functions were fitted to 40 individual growth curves (5 males and 35 females) of ostriches using nonlinear regression. In the second, performance of the functions was assessed when data from 71 individuals were composited (570 data points). This comparison was undertaken using nonlinear mixed models and considering 3 approaches: 1) models with no random effect, 2) random effect incorporated as the intercept, and 3) random effect incorporated into the asymptotic weight parameter (Wf). The results from the first comparison showed that the functions generally gave acceptable values of R2 and residual variance. On the basis of the Akaike information criterion (AIC), CBP gave the best fit, whereas the Gompertz and Lomolino equations were the preferred functions on the basis of corrected AIC (AICc). Bias, accuracy factor, the Durbin-Watson statistic, and the number of runs of sign were used to analyze the residuals. CBP gave the best distribution of residuals but also produced more residual autocorrelation (significant Durbin-Watson statistic). The functions were applied to sample data for a more conventional farm species (2 breeds of cattle) to verify the results of the comparison of fit among functions and their applicability across species. In the second comparison, analysis of mixed models showed that incorporation of a random effect into Wf gave the best fit, resulting in smaller AIC and AIC values compared with those in the other 2 approaches. On the basis of AICc, best fit was achieved with CBP, followed by gMM, Lomolino, and Richards functions, respectively. The exponential, MM, Pareto, and EVD equations produced negative values for initial weight (W0) if left unconstrained. The Gompertz equation, in spite of having a fixed inflection point and therefore being less flexible, gave accurate estimates of both W0 and Wf and an acceptable goodness of fit favored by having fewer parameters than the other sigmoidal functions. Nevertheless, all the sigmoidal functions appeared appropriate in describing the growth trajectory of male and female ostriches to a reasonable level of accuracy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.006
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.010
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0030.003
Science and technology studies0.0010.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.248
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2015
Admission routes2
Has abstractyes

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