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Comparative morphology of the rat optic nerve using light and electron microscopy

2010· article· en· W2275758612 on OpenAlexaff
Joshua Kyle Duncan, Bryan Anderson, Jason A. Kaufman, Andrew N. Iwaniuk, T. Bucky Jones, D. F. Bray, Lawrence Suchocki, Margaret Hall

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldMedicine
TopicTraumatic Brain Injury and Neurovascular Disturbances
Canadian institutionsUniversity of Lethbridge
Fundersnot available
KeywordsLuxol fast blue stainOptic nerveElectron microscopeNerve fiberAnatomyStereologyMaterials scienceChemistryPathologyBiologyMedicineOpticsCentral nervous systemMyelinPhysicsNeuroscience

Abstract

fetched live from OpenAlex

Optic nerve fibers are the axons of retinal ganglion cells, and as such they can provide information about the visual acuity and sensitivity capabilities of an animal. Consistent optic nerve fiber counts are not currently available for most animals. In this study, using light microscopy, we counted optic nerve fibers for 7 nerves from 4 adult Sprague‐Dawley rats. Using unbiased stereology we counted 4 adjacent sections of each nerve at 1000X, each using a different staining technique, including Bielschowsky's silver impregnation , Bodian's protagarol , Luxol Fast Blue stain, and a combination Bodian's protagarol and Luxol Fast Blue. We obtained counts of 75,000 to 90,000 fibers, with a fiber size range of 0.1μm to 5μm. We also examined preliminary electron micrographs of one Sprague‐Dawley rat optic nerve at magnifications up to 10,000X. Published counts of the pigmented rat optic nerve fibers using electron microscopy are 120,000, with a size range of 0.4μm to 5μm. This is significantly higher than our light microscopy counts. However, using EM at 10,000X we observe myelinated fibers as small as 0.02.μm. This discrepancy in fiber numbers calls into question which methodology is most suitable for counting myelinated fibers within the optic nerve. Grant Funding Source : Kenneth A. Suarez fellowship

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.312
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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