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Record W2276239040 · doi:10.14288/1.0092660

Assessing exposure to Cryptococcus gattii

2010· article· en· W2276239040 on OpenAlexaboutno aff
Andrea Griffiths

Bibliographic record

VenuecIRcle (University of British Columbia) · 2010
Typearticle
Languageen
FieldMedicine
TopicFungal Infections and Studies
Canadian institutionsnot available
Fundersnot available
KeywordsCryptococcus gattiiCryptococcosisCryptococcusBiologyMicrobiology

Abstract

fetched live from OpenAlex

Cryptococcus gattii is an encapsulated basidomycetous yeast that is capable of causing cryptococcosis in humans and animals. The disease caused by C. gattii frequently begins with pneumonia which in some cases can disseminate into fatal form of meningitis. Traditionally, this organism was thought to occur globally in tropical and subtropical regions, however recently it has been isolated from the Coastal Douglas Fir Zone on Vancouver Island, British Columbia (BC), a coastal temperate zone. From 1999 to present, there have been more than 130 human cases of Cryptococcosis caused by C. gattii on Vancouver Island and numerous cases in companion animals and wildlife. The aim of this study was to develop an assay to identify biomarkers of exposure to C. gattii which could be used to determine the extent of exposure of residents of BC. A Western blot analysis was developed to identify cytoplasmic antigens isolated from C. gattii which are recognized by antibodies in test sera. The sera of 77 Vancouver Island residents were tested following the 1999 outbreak of C. gattii and greater than 80% of those tested (at a 1 in 250 dilution of serum) were found to have antibodies against cytoplasmic antigens unique to the organism. Conversely, at the same dilution only 25% of those tested (n=51) from other areas of BC, the Yukon and Northwest Territories prior to the 1999 outbreak had antibodies against C. gattii antigens. The most commonly recognized antigens were 20 kDa and 50 kDa in size and their identity is presently unknown. This Western blot analysis has proven to be a useful means of suggesting potential biomarkers of exposure to C. gattii in a population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.092
Threshold uncertainty score0.183

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.226
Teacher spread0.213 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2010
Admission routes1
Has abstractyes

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