MétaCan
Menu
Back to cohort

Structural and Functional Changes in the C‐terminal Regulatory Tail of the Na+/H+ Exchanger Mediate Phosphorylation Induced Regulation

2012· article· en· W2278892110 on OpenAlexafffundabout
Xiuju Li, Larry Fliegel

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon Transport and Channel Regulation
Canadian institutionsUniversity of Alberta
FundersCanadian Institutes of Health Research
KeywordsIntracellular pHSodium–hydrogen antiporterPhosphorylationIntracellularExtracellularMutantGene isoformTrypsinChemistryMutationCytoplasmBiochemistryMolecular biologyCell biologyBiologyEnzymeGeneSodium

Abstract

fetched live from OpenAlex

The Na + /H + exchanger isoform 1 (NHE1) is a plasma membrane pH regulatory protein that removes one intracellular H+ in exchange for an extracellular Na+. NHE1 is inactive at alkaline intracellular pH but is active with decreasing pHi. The set point of the protein is altered by phosphorylation of the cytoplasmic tail. We examined the mechanism by which phosphorylation mediates NHE1 activation. In the full length protein, mutation of Ser 770 and Ser 771 to either Asp or Ala resulted in an inability to stimulate the protein by sustained intracellular acidosis. By using western blotting against the HA‐tagged full length NHE1 protein, we found that NHE1 proteins with the mutation S726/729D and S770/771A showed no difference in the digestion pattern or sensitivity to digestion compared with the wild type. However, the S770/771D mutant always appeared to be more sensitive to digestion with trypsin than controls. We examined the expressed C‐terminal regulatory region of NHE1 with and without phosphomimetic S770/771D mutations. These NHE1 proteins had varying sensitivity to trypsin digestion. This difference did not occur with phosphomimetic mutations at S703D, S726/729D. The results suggest that phosphorylation of NHE1 at Ser 770 and Ser 771 causes a significant changed in the conformation of the NHE1 regulatory tail that may affect NHE1 activity. Supported by Canadian Institutes of Health Research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.711
Threshold uncertainty score0.189

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.224
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes3
Has abstractyes

Explore more

Same venueThe FASEB JournalSame topicIon Transport and Channel RegulationFrench-language works237,207