MétaCan
Menu
← Back to cohort

Identification of RGS4 structures involved in its plasma membrane localization

2010· article· en· W2279259165 on OpenAlexafffundabout
Guillaume Bastin, Karanjit Lachhar, Alex Seong, Scott P. Heximer

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsHeart and Stroke FoundationUniversity of Toronto
FundersHeart and Stroke Foundation of Canada
KeywordsCell biologyBiologyHEK 293 cellsSubcellular localizationComputational biologyReceptorCytoplasmBiochemistry

Abstract

fetched live from OpenAlex

RGS4 is highly expressed in the sinoatrial node of the heart and plays an important role in the regulation of M2R‐mediated heart rate control. In order understand the intracellular mechanisms that may regulate RGS4 function in the heart and other tissues we set out to identify the key determinants of RGS4 function in cell culture models. Previous studies have shown that optimal function of R4 group proteins requires their efficient plasma membrane targeting. Based on their high degree of similarity, we set out to compare the localization and function of RGS4 and RGS5 in mammalian cells. Confocal microscopy shows that RGS4‐YFP is mainly localized to the plasma membrane of HEK cells whereas RGS5‐YFP, as reported previously, is found primarily in the cytosol. Comparison of the sequence differences between RGS4 and RGS4 has identified several regions in RGS4 that may promote its increased localization to the plasma membrane. Chimeric YFP‐tagged cDNA constructs for RGS4:RGS5 and RGS5:RGS4 indicate that critical residues in the carboxyl‐terminal domain of RGS4 (including the RGS box) may promote its specific targeting to the plasma membrane but that G‐protein binding is not required for this function. Current studies are aimed at defining the specific residues within the carboxyl terminal that promote its increased localization and function. This study was funded by the Heart and Stroke Foundation of Ontario Grant‐in‐Aid Program grants T6799

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.253
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes3
Has abstractyes

Explore more

Same venueThe FASEB Journal→Same topicCardiac electrophysiology and arrhythmias→French-language works237,207→