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Eps15, but not AP‐2, is recruited and essential for the formation of enteropathogenic <i>E. coli</i> pedestals

2010· article· en· W2288389718 on OpenAlexafffund
Ann E. Lin, Alexandre Benmerah, Julian A. Guttman

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldMedicine
TopicMonoclonal and Polyclonal Antibodies Research
Canadian institutionsSimon Fraser University
FundersCanadian Institutes of Health Research
KeywordsEndocytic cycleInternalizationCell biologyEnteropathogenic Escherichia coliEndocytosisEffectorBiologyPhosphorylationExtracellularActinMicrobiologyVirulenceReceptorBiochemistry

Abstract

fetched live from OpenAlex

Enteropathogenic Escherichia coli (EPEC) are extracellular pathogens that cause serious infantile diarrhea. The hallmark of EPEC pathogenesis is its ability to colonize the surface of gut epithelial cells and inject effector proteins to hijack sub‐cellular components, forming characteristic actin‐rich pedestals beneath the attached bacteria. Efficient formation of pedestals requires the phosphorylation of the EPEC effector protein Tir at Tyrosine 474 (Y474). Clathrin, a key component in receptor‐mediated endocytosis, was previously found to participate in pedestal formation. We examined the clathrin‐associated endocytic proteins AP‐2 and its binding partner, Eps15. We found that Eps15 is recruited to the pedestal together with clathrin while AP‐2 is not. Further analysis using GFP‐Eps15 mutants revealed that such recruitment does not require the AP‐2 binding domain at the Eps15 C‐terminus, confirming previous results that pedestal forms efficiently in the absence of AP‐2. RNA interference showed that pedestal formation is inhibited in the absence of Eps15, suggesting Eps15 is required to generate pedestals. Finally we showed that Eps15 recruitment to pedestals required Tir Y474 phosphorylation. These results reveal a novel internalization subversion strategy employed by extracellular pathogens, supporting the recent paradigm that endocytic proteins are important for EPEC‐mediated disease. Grant Funding Source: CIHR

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.318
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes2
Has abstractyes

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