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Record W2289838293 · doi:10.14196/sjas.v5i2.2107

Intestinal microbiota of ornamental fish Carassius auratus

2016· article· en· W2289838293 on OpenAlexaboutno aff
Dafne Itzel Orozco Rojas, María del Carmen Monroy‐Dosta, Jorge Castro Mejía, Aida Hamdan Partida, Alberto Ramírez Torrez

Bibliographic record

VenueScientific Journal of Animal Science · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
TopicAquaculture disease management and microbiota
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyMicrobiologyAeromonasFirmicutesAeromonas veroniiFood scienceBacteria16S ribosomal RNA

Abstract

fetched live from OpenAlex

Intestinal microbiota is an essential component for any organism life, because it directly affects nutrient assimilation, growth and health processes. However, in many animals and in case of fish is unknown how Intestinal microbiota is formed, which species are dominant and which one has capacity probiotic for use in aquaculture. The goal of this study was to establish the bacterial load that dominates the back intestine of Carassius auratus. A batch of 200 healthyjuvenilefishes were obtained from an ornamental fish farm in Mexico City. The fish were maintained in two culture beakers of 100 L during 15 day to acclimatization to ensure any sign of injury disease. To extract the back of gastrointestinal tract, which was rinse several times with distilled water for food and feces residues elimination. The sample was inoculated in 9 mL of sterile saline solution and from this, three dilutions in a 1:10 relation were made, inoculating 0.1 mL from each dilution in agar plates MRS, BHI and TCBS, and were incubated at 27oC for 24 hours. Subsequently a colony forming units (CFU mL-1) count was made, with the help of a Quebec counter type. Colonies were purified through successive inoculations. The molecular identification was made out by sequencing the gene RNAr 16S using Wizard Genomic. Molecular identification showed that the back region of the intestinal tract of C. auratus was dominated by phylum Proteobacteria and Firmicutes represented by the genus Bacillus , Vibrio , Vagococcus , Brevibacillus , Aeromonas , Pseudomonas , Shewanella , Enterococcus , Paenibacillus and Morganella. In relation to bacterial abundance by specie it was established that Bacillus sp. and Pseudomonas stutzeri were the most abundant reaching CFU mL -1 counts of 210 and 167 respectively, followed by Paenibacillus lactis with 103 CFU mL -1 and Bacillus cereus with 100 CFU mL -1 while Enterococcus eurekensis was the least abundant with an average value of 6 CFU mL -1 .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.020

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.244
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes1
Has abstractyes

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