MétaCan
Menu
Back to cohort
Record W2290324741 · doi:10.1093/hmg/ddw027

Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes

2016· article· en· W2290324741 on OpenAlexafffund
Mitchell J. Machiela, Qing Lan, Susan L. Slager, Roel Vermeulen, Lauren R. Teras, Nicola J. Camp, James R. Cerhan, John J. Spinelli, Sophia Wang, A. Nieters, Joseph Vijai, Meredith Yeager, Z. Wang, Hervé Ghesquières, James McKay, Lucía Conde, Paul I. W. de Bakker, David G. Cox, Laurie Burdett, Alain Monnereau, Christopher R. Flowers, Anneclaire J. De Roos, Angela Brooks‐Wilson, Graham G. Giles, Mads Melbye, Jian Gu, Rebecca D. Jackson, Eleanor Kane, Mark P. Purdue, Claire M. Vajdic, Demetrius Albanes, Rachel S. Kelly, Mariagrazia Zucca, Kimberly A. Bertrand, Anne Zeleniuch‐Jacquotte, Charles R. Lawrence, Amy Hutchinson, Degui Zhi, Thomas M. Habermann, Brian K. Link, Anne J. Novak, Ahmet Doǧan, Yan W. Asmann, Mark Liebow, Carrie A. Thompson, Stephen M. Ansell, Thomas E. Witzig, Hervé Tilly, Corinne Haïoun, Thierry Jo Molina, Henrik Hjalgrim, Bengt Glimelius, Hans‐Olov Adami, Göran Roos, Paige M. Bracci, Jacques Riby, Martyn T. Smith, Elizabeth A. Holly, Wendy Cozen, Patricia Hartge, Lindsay M. Morton, Richard K. Severson, Lesley F. Tinker, Kari E. North, Nikolaus Becker, Yolanda Benavente, Paolo Boffetta, Paul E. Brennan, Lenka Foretová, Marc Maynadié, Anthony Staines, Tracy Lightfoot, Simon Crouch, Alexandra Smith, Eve Roman, W. Ryan Diver, Kenneth Offit, Andrew D. Zelenetz, Robert J. Klein, Danylo Villano, Tongzhang Zheng, Yawei Zhang, Theodore R. Holford, Jennifer Turner, Melissa C. Southey, Jacqueline Clavel, Jarmo Virtamo, Stephanie J. Weinstein, Elio Ríboli, P. Vineis, Rudolph Kaaks, Heiner Boeing, Anne Tjønneland, Emanuele Angelucci, Simonetta Di Lollo, Marco Rais, Immaculata De Vivo, Edward L. Giovannucci, Peter Kraft, Jinyan Huang, Baoshan Ma, Yuanqing Ye, Brian C.‐H. Chiu, Liming Liang, Ju Hyun Park, Charles C. Chung, Dennis D. Weisenburger, Joseph F. Fraumeni, Gilles Salles, Martha Glenn, Lisa Cannon‐Albright, Karen Curtin, Xifeng Wu, Karin E. Smedby, Sílvia de Sanjosé, Christine F. Skibola, S.I. Berndt, Brenda M. Birmann, Stephen J. Chanock, Nathaniel Rothman

Bibliographic record

VenueHuman Molecular Genetics · 2016
Typearticle
Languageen
FieldMedicine
TopicTelomeres, Telomerase, and Senescence
Canadian institutionsBC Cancer AgencySimon Fraser UniversityCanadian Centre for Applied Research in Cancer ControlPublic Health OntarioBC Centre for Disease ControlUniversity of British Columbia
FundersNational Center for Advancing Translational SciencesNational Center for Chronic Disease Prevention and Health PromotionNational Institute of Environmental Health SciencesNational Cancer InstituteNational Heart, Lung, and Blood InstituteCancer Council NSWMedical Research CouncilUniversity of Texas MD Anderson Cancer CenterInstitut National Du CancerCenters for Disease Control and PreventionNational Institutes of HealthAgence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du TravailLeukemia and Lymphoma ResearchNational Health and Medical Research CouncilUniversity at BuffaloRegione Autonoma della SardegnaAssociazione Italiana per la Ricerca sul CancroUniversity of PittsburghStockholms Läns LandstingUniversity of UtahFondation de FranceGeneralitat de CatalunyaCanadian Institutes of Health ResearchBundesamt für StrahlenschutzMedStar Health Research InstituteCancerfondenBundesministerium für Bildung und ForschungU.S. Department of Health and Human ServicesUniversity of California, San FranciscoMichael Smith Health Research BCNational Institute on AgingHealth Research BoardNational Cancer Research InstituteHuntsman Cancer InstituteJosé Carreras Leukämie-StiftungYale UniversityKarolinska InstitutetUtah State UniversityWake Forest UniversityOhio State UniversityUniversity of SydneyWorld Health OrganizationUniversity of Southern CaliforniaCancer Research UKAmerican Cancer SocietyNational Human Genome Research InstituteCancer Council VictoriaCompagnia di San PaoloU.S. Department of Veterans AffairsEuropean CommissionUtah Department of HealthBrigham and Women's HospitalMemorial Sloan-Kettering Cancer Center
KeywordsTelomereChronic lymphocytic leukemiaLymphomaOdds ratioBiologyGenotypeFollicular lymphomaSingle-nucleotide polymorphismOncologyInternal medicineImmunologyGeneticsLeukemiaMedicineGene

Abstract

fetched live from OpenAlex

Evidence from a small number of studies suggests that longer telomere length measured in peripheral leukocytes is associated with an increased risk of non-Hodgkin lymphoma (NHL). However, these studies may be biased by reverse causation, confounded by unmeasured environmental exposures and might miss time points for which prospective telomere measurement would best reveal a relationship between telomere length and NHL risk. We performed an analysis of genetically inferred telomere length and NHL risk in a study of 10 102 NHL cases of the four most common B-cell histologic types and 9562 controls using a genetic risk score (GRS) comprising nine telomere length-associated single-nucleotide polymorphisms. This approach uses existing genotype data and estimates telomere length by weighing the number of telomere length-associated variant alleles an individual carries with the published change in kb of telomere length. The analysis of the telomere length GRS resulted in an association between longer telomere length and increased NHL risk [four B-cell histologic types combined; odds ratio (OR) = 1.49, 95% CI 1.22-1.82,P-value = 8.5 × 10(-5)]. Subtype-specific analyses indicated that chronic lymphocytic leukemia or small lymphocytic lymphoma (CLL/SLL) was the principal NHL subtype contributing to this association (OR = 2.60, 95% CI 1.93-3.51,P-value = 4.0 × 10(-10)). Significant interactions were observed across strata of sex for CLL/SLL and marginal zone lymphoma subtypes as well as age for the follicular lymphoma subtype. Our results indicate that a genetic background that favors longer telomere length may increase NHL risk, particularly risk of CLL/SLL, and are consistent with earlier studies relating longer telomere length with increased NHL risk.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.398
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.221
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations59
Published2016
Admission routes2
Has abstractyes

Explore more

Same venueHuman Molecular GeneticsSame topicTelomeres, Telomerase, and SenescenceFrench-language works237,207