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The role of MMP2 in persistent inflammation in Chronic Obstructive Pulmonary Disease (COPD)

2009· article· en· W2290972414 on OpenAlexafffund
John V. Gosselink, Shizu Hayashi, W. Mark Elliott, Li Xing, Becky Chan, Claire Wright, Peter D. Paré, Don D. Sin, John Pierce, Richard N. Pierce, Alex Patterson, J. R. Cooper, James C. Hogg

Bibliographic record

VenueThe FASEB Journal · 2009
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsUniversity of British Columbia Hospital
FundersCanadian Institutes of Health ResearchNational Institutes of Health
KeywordsMMP2COPDMedicineChemokineInflammationChemokine receptorBiomarkerLungInternal medicinePathologyImmunologyBiologyCancer

Abstract

fetched live from OpenAlex

Rationale MMP2 modifies chemokines in ways that allow them to continue to bind to their receptors but fail to activate them (Science. 2000, 289:1202‐6). Objective To investigate the role of MMP2 expression and activity in the development of the persistent inflammatory process associated with progression of COPD. Methods The expression of MMP2 was measured by Taqman quantitative PCR in 136 paired samples of small bronchioles and surrounding lung tissue separated by laser capture microdissection from 63 patients in all 4 categories of COPD severity. MMP2 mRNA expression was compared to forced expiratory volume in one second (FEV 1 ) by linear regression analysis. As well, MMP2 activity was measured in 11 of these COPD patients' lungs by gelatin zymography. Results MMP2 expression and activity decreased in both the small airways and surrounding lung tissue with disease progression in COPD. Conclusions This sharp reduction of MMP2 expression and activity may contribute to the persistence of the inflammatory process in COPD by reducing the proteolytic modification of chemokines that normally blocks chemokine receptors to reduce the inflammatory response. Supported by grants NIH‐HL‐P50 084922 and CIHR MOP‐82815

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.266
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes2
Has abstractyes

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Same venueThe FASEB Journal→Same topicChronic Obstructive Pulmonary Disease (COPD) Research→French-language works237,207→