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Phenotype‐Specific Permeability Transition Pore Regulation in Rat Skeletal Muscle

2008· article· en· W2291274102 on OpenAlexafffund
Martin Picard, Jimmy Mattas, Alexis Ascah, Kristina Csukly, Richard Godin, Yan Burelle

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle Physiology and Disorders
Canadian institutionsUniversité de MontréalMcGill University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsMitochondrionMitochondrial permeability transition poreChemistrySkeletal muscleCitrate synthaseInternal medicineEnzymeBiochemistryEndocrinologyBiologyApoptosisProgrammed cell deathMedicine

Abstract

fetched live from OpenAlex

The aim of this study was to determine whether the susceptibility of mitochondria to opening of the permeability transition pore (PTP) varies according to muscle phenotype represented by the soleus (SOL: 95% type I fibers) and superficial white gastrocnemius (WG: 92% type IIb fibers). Sensitivity to Ca 2+ ‐induced PTP opening was determined with a novel approach using permeabilized myofibers devoid of their contractile apparatus (phantom fibers). Ca 2+ uptake in this preparation is specific to mitochondria and calcium retention capacity (CRC) is a good indicator of PTP sensitivity. Mitochondrial volume density was ~ 2 fold greater in SOL vs. WG, as judged by respiratory capacity per mg fiber weight and activity of the marker enzyme citrate synthase (CS). CRC values were 2.2 fold lower in phantom fibers from SOL compared to WG when expressed per unit of CS (CRC: 36.6±9.9 vs. 81.0±26.2 pmol Ca 2+ /mIU CS; p<0,001; n=4), indicating a pronounced vulnerability to PTP opening in type I vs. IIb fibers . A similar phenomenon was also observed in isolated mitochondria (CRC: <83 and 121 ± 60 nmol Ca 2+ /mg prot. in SOL and WG). This phenomenon was partly due to a 2‐fold increase in endogenous matrix Ca 2+ levels in mitochondria from SOL compared to WG, but not to enhanced ROS production. Expression of the PTP regulatory protein cyclophilin‐D was similar in mitochondria from both muscles. However, expression of ANT, a protein reported to be involved in pore formation and which contributes to Ca 2+ ‐sensitivity of the PTP, was significantly 2.3 fold higher in SOL compared to WG. The present study provides evidence that regulation of the PTP varies according to the phenotype of muscle fibers , which may impact on muscle cell death under conditions of stress. Funded by NSERC .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.224
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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