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Identification and characterization of a novel Muscle Lamin A/C (LMNA) Interacting Protein (MLIP): A regulator of Pax7

2008· article· en· W2301745524 on OpenAlexafffund
Elmira Ahmady, Patrick G. Burgon

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicNuclear Structure and Function
Canadian institutionsUniversity of Ottawa
FundersCanadian Institutes of Health Research
KeywordsLMNAMyogenesisMyoDMyogeninMYF5C2C12MyocyteBiologyLaminGene knockdownSkeletal muscleMolecular biologyCell biologyNuclear laminaNuclear proteinTranscription factorGeneticsCell cultureEndocrinologyGene

Abstract

fetched live from OpenAlex

Specific missense mutations LMNA have been identified to be associated with muscular dystrophy suggesting that LMNA interacts with a muscle specific factor(s). A yeast two‐hybrid screen with LMNA as bait was employed to identify muscle specific proteins. A previously uncharacterized cDNA clone was identified that interacts with LMNA in muscle, MLIP. Preliminary results show MLIP protein is primarily expressed in brain, heart and skeletal muscle. No structural or functional domains have been identified within MLIP. Objective: To define the function of MLIP in muscle. Results: MLIP is expressed endogenously in a mouse myoblast cell line (C2C12) and is co‐localized to the nuclear envelope and PML bodies. Initiation of C2C12 differentiation led to a 3‐fold increase in MLIP expression peaking at 24hrs and MLIP continued to be expressed in differentiated myotubes. Specific knockdown of MLIP in C2C12 cells by shRNAi led to significant (p<0.01) reduction in Pax7 expression with a concurrent reduction in Myf5, MyoD and myogenin with Pax3 expression being unaffected. To determine whether MLIP is necessary and/or sufficient for myogenic differentiation, stable C2C12 cell lines are being generated that either knockdown MLIP or over‐express MLIP. Conclusion: MLIP is a novel LMNA interacting protein that may regulate Pax7 a myogenic determinant during regenerative myogenesis. Funding: CIHR operating grant to PGB.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.047
Threshold uncertainty score0.142

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.214
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes2
Has abstractyes

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