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Record W2302433165 · doi:10.1385/1-59259-187-6:143

Studies of the Molecular Basis for Cystic Fibrosis Using Purified Reconstituted CFTR Protein

2003· article· en· W2302433165 on OpenAlexaff
Ilana Kogan, Mohabir Ramjeesingh, Canhui Li, Christine E. Bear

Bibliographic record

VenueHumana Press eBooks · 2003
Typearticle
Languageen
FieldMedicine
TopicCystic Fibrosis Research Advances
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsCystic fibrosis transmembrane conductance regulatorChloride channelGatingATP hydrolysisChemistryBiochemistryCyclic nucleotide-binding domainCystic fibrosisTransmembrane proteinCell biologyBiophysicsProtein kinase AProtein subunitMembrane proteinMembranePhosphorylationBiologyNucleotideATPaseEnzymeReceptorGenetics

Abstract

fetched live from OpenAlex

Studies of purified, reconstituted cystic fibrosis transmembrane conductance regulator (CFTR) protein have proven invaluable in defining those functions that are intrinsic to the CFTR molecule. Reconstitution of purified CFTR protein in planar lipid bilayers provided direct evidence that CFTR possesses intrinsic activity as a protein kinase A (PKA)-regulated chloride channel ( 1 ). Further, it appears that the regulation of the CFTR channel gate (the structure essential for opening and closing of the channel pore) reported in biological membranes has been recapitulated with fidelity in studies of reconstituted purified protein. For example, patch clamp studies on biological membranes revealed that ATP binding and/or hydrolysis by the PKA-phosphorylated CFTR channel caused channel opening and closing ( 2 - 6 ). This unique requirement for ATP in channel gating was also reported in reconstitution studies of the purified protein ( 7 , 8 ), indicating that the CFTR protein itself can mediate regulated chloride flux without the requirement for accessory proteins. These results also justify the use of purified protein in detailed biochemical and structural studies of mechanisms underlying the function of this protein. The CFTR molecule is known to be comprised of two membrane-spanning domains (TMDs), two nucleotide-binding domains (NBDs), and the phosphorylationdependent regulatory or R domain ( 9 ). However, to date, our understanding of the structure of these domains and the coordination of their activities is limited.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.128
GPT teacher head0.369
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2003
Admission routes1
Has abstractyes

Explore more

Same venueHumana Press eBooksSame topicCystic Fibrosis Research AdvancesFrench-language works237,207