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Dimerization of the plasma membrane Na <sup>+</sup> /H <sup>+</sup> exchanger type 3 (NHE3)

2010· article· en· W2305231375 on OpenAlexaff
Victor Babich, I. Alexandru Bobulescu, Daniel G. Fuster, Serge M. Gisler, Olivier Bonny, Donald W. Hilgemann, Igor Štagljar, Orson W. Moe

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon Transport and Channel Regulation
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsChemistryDimerSodium–hydrogen antiporterMutantWild typeBiophysicsTransport proteinTransmembrane proteinMembraneCell biologyBiochemistryBiologyGeneReceptor

Abstract

fetched live from OpenAlex

Many transmembrane transport proteins are known or inferred to function as homo or hetero oligomers. NHE3 has been reported to associate in oligomers. However, the direct NHE3‐NHE3 interaction, the oligomer configuration and the significance of oligomerization for NHE3 function and regulation are unknown. Using split‐ubiquitin yeast two‐hybrid system for membrane protein‐protein interactions and co‐immunoprecipitation in mammalian cells, we demonstrated that full‐length NHE3, its C‐terminal truncations, but not full‐length NHE1, interact with full‐length NHE3 prey and NHE3 exists as an oligomer in mammalian cells. We confirmed that NHE3 is a dimer on the plasma membrane by counting photobleaching steps in total internal reflection fluorescence images of NHE3‐mGFP expressed in NHE‐null cells. In its native state in opossum kidney cells, NHE3 exhibits highly cooperative Na + kinetics compatible with two substrate binding sites. To show functional cross‐talk between two NHE3 molecules in a dimer we used two NHE3 mutants: S552A/S605G (abolished regulation by protein kinase A, PKA) and E213I (transport defective). The transport activity of NHE‐null cells expressing S552A/S605G NHE3 mutant was comparable to wild‐type NHE3, but it was not affected by PKA activation. Co‐expression of both S552A/S605G and E213I NHE3 mutants restored the exchanger activity along with the PKA regulation. These findings suggest that NHE3 is present at the plasma membrane as homo dimers and NHE3 dimers may constitute the functional units of the transport and affect its regulation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.414

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.217
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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