Alteration of the H-Bond to the A<sub>1A</sub> Phylloquinone in Photosystem I: Influence on the Kinetics and Energetics of Electron Transfer
Bibliographic record
Abstract
In Photosystem I, the backbone nitrogen of Leu722(PsaA) forms a hydro-gen bond with the C(4) carbonyl oxygen of phylloquinone in the A(1A) site. A previous low-temperature EPR study indicated that substitution of Leu722(PsaA) with a bulky Trp residue results in a weakened H-bond. Here, we employ room temperature, time-resolved optical spectroscopy and variable temperature, transient EPR spectroscopy to probe the effect of the altered H-bond on the energetics and kinetics of electron transfer. Relative to the wild type, we find that the rate of electron transfer from A(1A)(-) to F(X) in the L722W(PsaA) variant is faster by a factor of 3. This change is attributed to a lowered midpoint potential of A(1A)/A(1A)(-), resulting in a larger Gibbs free energy change between A(1A)/A(1A)(-) and F(X)/F(X)(-). An activation energy of 180±10 meV is determined for the A(1A)(-)-to-F(X) forward electron transfer step in the L722W(PsaA) variant compared with 220±10 meV in the wild type. The Arrhenius plot shows a break at ∼200 K, below which the rate becomes nearly independent of temperature. This behavior is described using a quantum mechanical treatment that takes the zero-point energy into account as well as an alternative model that invokes a dynamical transition in the protein at ∼200 K.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".