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Record W2315189679 · doi:10.1021/ct200569x

Cation−π and π–π Interactions in Aqueous Solution Studied Using Polarizable Potential Models

2011· article· en· W2315189679 on OpenAlexafffund
Esam A. Orabi, Guillaume Lamoureux

Bibliographic record

VenueJournal of Chemical Theory and Computation · 2011
Typearticle
Languageen
FieldPhysics and Astronomy
TopicSpectroscopy and Quantum Chemical Studies
Canadian institutionsConcordia University
FundersFonds Québécois de la Recherche sur la Nature et les Technologies
KeywordsChemistryAqueous solutionPolarizabilityMoleculeDimerComputational chemistryIonAb initioBenzenePotential of mean forceChemical physicsWater dimerInteraction energyCooperativityMolecular dynamicsAffinitiesAb initio quantum chemistry methodsBinding energyPhysical chemistryHydrogen bondStereochemistryOrganic chemistryAtomic physicsPhysics

Abstract

fetched live from OpenAlex

Polarizable potential models for the interaction of Li(+), Na(+), K(+), and NH4(+) ions with benzene are parametrized based on ab initio quantum mechanical calculations. The models reproduce the ab initio complexation energies and potential energy surfaces of the cation-π dimers. They also reproduce the cooperative behavior of "stacked", cation-π-π trimers and the anticooperative behavior of "sandwiched", π-cation-π trimers. The NH4(+) model is calibrated to reproduce the energy of the NH4(+)-H2O dimer and yields correct free energy of hydration and hydration structure without further adjustments. The models are used to investigate cation-π interactions in aqueous solution by calculating the potential of mean force between each of the four cations and a benzene molecule and by analyzing the organization of the solvent as a function of the cation-benzene separation. The results show that Li(+) and Na(+) ions are preferentially solvated by water and do not associate with benzene, while K(+) and NH4(+) ions bind benzene with 1.2 and 1.4 kcal/mol affinities, respectively. Molecular dynamics simulations of NH4(+) and of K(+) in presence of two benzene molecules in water show that cation-π and π-π affinities are mutually enhanced compared to the pairwise affinities, confirming that the cooperativity of cation-π and π-π interactions persists in aqueous solution.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.733
Threshold uncertainty score0.223

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.297
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations70
Published2011
Admission routes2
Has abstractyes

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