MétaCan
Menu
Back to cohort
Record W2315630015 · doi:10.1093/neuonc/nou275.32

SC-33 * POLYCOMB GROUP PROTEIN Bmi1 CONTROLS NEURAL STEM AND PROGENITOR CELL MAINTENANCE AND GLIOBLASTOMA TUMOUR DEVELOPMENT

2014· article· en· W2315630015 on OpenAlexaff
Parvez Vora, Chitra Venugopal, Maleeha Qazi, Sujeivan Mahendram, Nicole McFarlane, Sheila K. Singh

Bibliographic record

VenueNeuro-Oncology · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topic14-3-3 protein interactions
Canadian institutionsMcMaster UniversityOntario Institute for Cancer Research
Fundersnot available
KeywordsBMI1Neural stem cellProgenitor cellBiologyStem cellClonogenic assayCancer researchCarcinogenesisGene knockdownCell biologyCellCell cultureCancerGenetics

Abstract

fetched live from OpenAlex

Bmi1, a polycomb group protein is required for self-renewal of neural stem and progenitor cells (NSPCs). Elevated Bmi1 expression is observed in most brain tumours, including glioblastoma (GBM). GBM, one of the most aggressive and heterogeneous tumours is known to possess a subpopulation of brain tumour initiating cells (BTICs) that have acquired stem cell properties and are exclusively capable of driving tumour formation in a human-mouse xenograft model. These observations raise the question of whether over-expressing Bmi1 is sufficient to promote self-renewal or tumorigenesis by NSPCs and whether loss of Bmi1 in GBM BTICs affects the progression of brain tumours. Using lentiviral constructs, we studied the gain of Bmi1 in human NSPCs and observed increased self-renewal and proliferative capacity of these cells. Subsequently, OEBmi1 NSPCs were injected in NOD-SCID mouse brains to assess their tumorigenic ability. Furthermore, knockdown of Bmi1 was performed in human GBM BTICs, which resulted in inhibition of clonogenic potential in vitro as well as decreased tumour cell mass in vivo. Lastly, to determine the comprehensive Bmi1 transcriptional network in human NSPCs and GBM BTICs, we applied ChIP-seq strategy to discover if Bmi1 binds to the promoter region of genes critical for neural lineage commitment and if these genes are involved in brain tumour formation. Together with RNA-seq data from human NSPCs and GBM BTICs sorted for stem cell marker CD133, this data will generate a comprehensive genome-wide Bmi1 binding profile and identify critical downstream Bmi1 targets & signaling pathways important for brain tumour maintenance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.279
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.233
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2014
Admission routes1
Has abstractyes

Explore more

Same venueNeuro-OncologySame topic14-3-3 protein interactionsFrench-language works237,207