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Abstract SY07-02: Polarity proteins in morphogenesis and metastasis

2011· article· en· W2316413853 on OpenAlexaff
Luke McCaffrey, JoAnne Montalbano, Ian G. Macara

Bibliographic record

VenueCancer Research · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHippo pathway signaling and YAP/TAZ
Canadian institutionsMcGill University
Fundersnot available
KeywordsCell polarityMetastasisCancer researchBiologyContext (archaeology)Metastasis suppressorCancerSuppressorPrimary tumorMorphogenesisCell biologyCellGeneGenetics

Abstract

fetched live from OpenAlex

Abstract Loss of epithelial organization is a hallmark of carcinomas, but whether polarity regulates tumor growth and metastasis is poorly understood. A conserved set of polarity proteins, called PAR proteins, drives cell polarization in many contexts, and in Drosophila these proteins can function as tumor suppressors. However, to date, only Par4 (LKB1) has been implicated in human cancers. To determine whether other polarity proteins might have tumor suppressor functions in mammals, we have used lentiviruses to deliver oncogenes and shRNAs to primary murine mammary cells, which are then implanted into the cleared fat pads of isogenic host mice. Using this system, we silenced expression of the PAR3 polarity protein in the context of oncogenic Notch (NICD) or Ras. Depletion of Par3 dramatically reduced tumor latency in both models, producing tumors that were highly invasive and metastatic. Notably, the NICD/shPAR3 tumors retained epithelial character, with no evidence of epithelial-mesenchymal transition in either the primary tumors or the lung metastases. We have identified an unexpected signaling pathway that drives invasion in these tumors. Importantly, PAR3 protein expression is significantly reduced in ∼50% of human breast cancers, as compared to matched normal tissue. Together, these data provide a link between cell polarity, tissue organization, and metastasis. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 102nd Annual Meeting of the American Association for Cancer Research; 2011 Apr 2-6; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2011;71(8 Suppl):Abstract nr SY07-02. doi:10.1158/1538-7445.AM2011-SY07-02

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.068
Threshold uncertainty score0.229

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0680.025

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.142
GPT teacher head0.376
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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