MétaCan
Menu
Back to cohort

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2011 – 31 January 2012

2012· article· en· W2320575024 on OpenAlexaff
Maria Cristina Arias, Emilie Arnoux, James J. Bell, Abel Bernadou, GIORGIA BINO, Rumsaïs Blatrix, Denis Bourguet, Cecilia Carrea, Anne‐Laure Clamens, Haydée A. Cunha, Emmanuelle d’Alençon, Yi Ding, Champlain Djiéto-Lordon, M.P. Dubois, Pascal Dumas, Cyril Éraud, Bruno Faivre, Flávio de Oliveira Francisco, Elaine Françoso, Maria Elena García, Jonathan P. A. Gardner, Stéphane Garnier, Sylvie Gimenez, John R. Gold, D. James Harris, Guangcun He, Bart Hellemans, Christopher M. Hollenbeck, Shengli Jing, Gaël J. Kergoat, Bingfang Liu, Jan R. McDowell, Doyle McKey, Terrence L. Miller, Erica J. Newton, Katrina M. Pagenkopp Lohan, Chiara Papetti, Ian G. Paterson, Jean Peccoud, Xinxin Peng, Finn Piatscheck, Sergine Ponsard, Kimberly S. Reece, Céline Reisser, Mark A. Renshaw, Daniel E. Ruzzante, Mathieu Sauve, Jeffrey D. Shields, Antônio M. Solé‐Cava, Erika Souche, J. K. J. VAN HOUDT, Filip Volckaert, Shuzhen Wang, Jie Xiao, Hangjin Yu, Lorenzo Zane, BARBARA ZANNATO, Tyler Zemlak, Chunxiao Zhang, Yan Zhao, Xi Zhou, Lili Zhu

Bibliographic record

VenueMolecular Ecology Resources · 2012
Typearticle
Languageen
FieldEnvironmental Science
TopicFreshwater macroinvertebrate diversity and ecology
Canadian institutionsTrent UniversityDalhousie University
Fundersnot available
KeywordsBiologyZoologySciaenidaeMicrosatelliteFisheryEcologyGeneticsFish <Actinopterygii>Gene

Abstract

fetched live from OpenAlex

This article documents the addition of 473 microsatellite marker loci and 71 pairs of single-nucleotide polymorphism (SNP) sequencing primers to the Molecular Ecology Resources Database. Loci were developed for the following species: Barteria fistulosa, Bombus morio, Galaxias platei, Hematodinium perezi, Macrocentrus cingulum Brischke (a.k.a. M. abdominalis Fab., M. grandii Goidanich or M. gifuensis Ashmead), Micropogonias furnieri, Nerita melanotragus, Nilaparvata lugens Stål, Sciaenops ocellatus, Scomber scombrus, Spodoptera frugiperda and Turdus lherminieri. These loci were cross-tested on the following species: Barteria dewevrei, Barteria nigritana, Barteria solida, Cynoscion acoupa, Cynoscion jamaicensis, Cynoscion leiarchus, Cynoscion nebulosus, Cynoscion striatus, Cynoscion virescens, Macrodon ancylodon, Menticirrhus americanus, Nilaparvata muiri and Umbrina canosai. This article also documents the addition of 116 sequencing primer pairs for Dicentrarchus labrax.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.261
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.003
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0150.019

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.201
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2012
Admission routes1
Has abstractyes

Explore more

Same venueMolecular Ecology ResourcesSame topicFreshwater macroinvertebrate diversity and ecologyFrench-language works237,207