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Record W2321022453 · doi:10.1021/jp1067022

Molecular Dynamics Simulation Study of Water Surfaces: Comparison of Flexible Water Models

2010· article· en· W2321022453 on OpenAlexaff
Pak K. Yuet, Daniel Blankschtein

Bibliographic record

VenueThe Journal of Physical Chemistry B · 2010
Typearticle
Languageen
FieldPhysics and Astronomy
TopicSpectroscopy and Quantum Chemical Studies
Canadian institutionsDalhousie University
Fundersnot available
KeywordsMolecular dynamicsWater modelSurface tensionIntermolecular forceHydrogen bondIntramolecular forceFlexibility (engineering)ChemistryMoleculeChemical physicsMaterials scienceThermodynamicsComputational chemistryPhysicsMathematics

Abstract

fetched live from OpenAlex

Molecular dynamics (MD) simulation has been used extensively to study water surfaces. Nevertheless, the quantitative prediction of water surface tension has been controversial, since results from different simulation studies using the same water model may differ considerably. Recent research has suggested that bond flexibility, long-range electrostatic interactions, and certain simulation parameters, such as Lennard-Jones (LJ) cutoff distance and simulation time, may play an important role in determining the simulated surface tension. To gain better insight on the MD simulation of water surfaces, particularly on the prediction of surface tension, we examined seven flexible water models using a consistent set of simulation parameters. The surface tensions of the flexible, extended simple point charge (SPCE-F) model and the flexible three-center (F3C) model at 300 K were found to be 70.2 and 65.3 mN/m, respectively, in reasonable agreement with the experimental value of 71.7 mN/m. More importantly, however, detailed analysis of the interfacial structure and contributions from various interactions have revealed that the surface tension of water is determined by the delicate balance between intramolecular (bond stretching) and intermolecular (LJ) interactions, which reflects both the molecular orientation in the interfacial region and the density variation across the Gibbs dividing surface (GDS). In addition, the water molecules on the liquid side of the GDS were found to lie almost parallel to the surface, which helps to clarify the dual-layer structure suggested by sum-frequency generation spectroscopy. By correlating the simulated surface tensions of the seven water models with selected molecular parameters, it was found that the partial charge distribution in the water molecule is likely a key factor in determining the near-parallel alignment of water molecules with the surface.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.301
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations152
Published2010
Admission routes1
Has abstractyes

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