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Record W2322118450 · doi:10.1158/1538-7445.am2011-2727

Abstract 2727: The three-dimensional nuclear organization of telomeres during endometrial carcinoma development

2011· article· en· W2322118450 on OpenAlexaff
Adrian Danescu, Antonio Di Cristofano, Sabine Mai, Sabine Hombach‐Klonisch

Bibliographic record

VenueCancer Research · 2011
Typearticle
Languageen
FieldMedicine
TopicTelomeres, Telomerase, and Senescence
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsPTENTelomereBiologyPathologyIn situ hybridizationFluorescence in situ hybridizationHyperplasiaCarcinomaCancer researchMicrosatellite instabilityMedicineGene expressionGeneticsChromosomeGeneApoptosisPI3K/AKT/mTOR pathway

Abstract

fetched live from OpenAlex

Abstract Our study focuses on the nuclear 3D telomere architecture during development of endometrial carcinoma (EC). EC represents one of the most common gynecological malignancies. The diagnosis of definitive precancerous stages in endometrial tissue is challenging for pathologists. Type I EC develops from precursor glandular hyperplasic lesions followed by architectural tissue alterations. Tumor initiation and progression is accompanied by genetic instability. Loss of the tumor suppressor PTEN was shown to be an early marker for the transformation of glandular hyperplasia in type I EC. Alterations of the nuclear 3D telomere architecture are a sign of genomic instability and occur early in carcinoma development. We are using a heterozygous PTEN mouse model (+/-) to investigate changes in the nuclear 3D telomere organizations during EC development. PTEN+/- mice develop endometrial hyperplasia that progresses into atypical hyperplasia (AH), carcinoma in situ and invasive carcinoma, similar to the observed type-I EC development in humans. We hypothesize that changes in the nuclear 3D telomere architecture precede the development of carcinoma and can be detected prior to morphological evidence for EC. Paraformaldehyde fixed and paraffin embedded uterine tissues from age-matched (1, 7 and 10 months) wildtype (wt) and PTEN+/- mice with AH and EC were stained with hematoxylin and eosin (H&E) for morphological analysis. PTEN expression was detected by immunohistochemistry. We performed 3D telomere fluorescence in-situ hybridization (FISH) using a Cy3-labeled peptide nucleic acid telomere (PNA) probe followed by fluorescence microscopy and quantitative image analysis using TeloViewTM. The number of telomeres, telomere length, telomere aggregates and the position of telomeres in individual nuclei were assessed. PTEN+/- mice at 7 months of age showed extensive lesions of AH with stratified glandular epithelium, increased gland to stroma ratio, and nuclear atypia. At 10 months of age, EC lesions are present with multi-layered cribriform and highly anaplastic epithelium. Wt uterine glandular cells expressed strong PTEN immunoreactivity at 7 and 10 months of age, but PTEN protein expression was reduced in hyperplasic lesions of PTEN+/- mice at 7 months of age and in EC lesions at 10 months of age indicating inactivation of the remaining PTEN allele prior to carcinoma development. Compared to age-matched wt controls, hyperplasic lesions already showed a trend towards shorter telomeres. A high number of short telomeres and an increase in telomeric aggregates were detected in EC lesions. An increased a/c ratio, a means of spatial 3D nuclear telomere distribution, in EC lesions is indicative for a higher proliferation rate. Our ongoing investigation of the 3D telomere organization in younger PTEN +/- mice will determine potential telomere alterations in early hyperplasic lesions. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 102nd Annual Meeting of the American Association for Cancer Research; 2011 Apr 2-6; Orlando, FL. Philadelphia (PA): AACR; Cancer Res 2011;71(8 Suppl):Abstract nr 2727. doi:10.1158/1538-7445.AM2011-2727

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.114
GPT teacher head0.337
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2011
Admission routes1
Has abstractyes

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