MétaCan
Menu
Back to cohort

O4-S1.02 Molecular cloning and expression of hydrogenosomal malate dehydrogenase of<i>Trichomonas vaginalis</i>

2011· article· en· W2325689136 on OpenAlexaff
Shahed Ardalan, C Lee, Gary Garber

Bibliographic record

VenueSexually Transmitted Infections · 2011
Typearticle
Languageen
FieldImmunology and Microbiology
TopicReproductive tract infections research
Canadian institutionsOttawa HospitalUniversity of Ottawa
Fundersnot available
KeywordsMalate dehydrogenaseMolecular biologyTrichomonas vaginalisRecombinant DNABiologyRestriction enzymeMolecular cloningGeneBiochemistryPeptide sequenceEnzymeMicrobiology

Abstract

fetched live from OpenAlex

Background Trichomoniasis, a sexually transmitted disease caused by Trichomonas vaginalis , is associated with adverse pregnancy outcomes, and increased risk of HIV acquisition. Malate dehydrogenase (MDH), which catalyses the interconversion of malate to oxaloacetate, has a pivotal role in the survival and pathogenicity of this amitochondrial protozoan. The objective of this study was to clone and express Malate dehydrogenase gene of T vaginalis , and analyse the biological function of this hydrogenosomal enzyme. Methods The MDH gene from a clinical isolate of T vaginalis was amplified by PCR, and cloned into pET101/D-TOPO vector with a C-terminal 6XHis tag. Positive clones were screened and identified by restriction endonuclease digestion and sequence analysis. The plasmid pET101/D-MDH was then transformed into E.coli BL21(DE3) to express after IPTG induction. The expression product further analysed by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) and Western blotting. The recombinant protein was purified with Ni-NTA agarose under native conditions. Western blot, using antibody raised against whole cell T vanginalis , was performed to determine the immunogenicity of purified recombinant protein. Results The recombinant plasmid pET101/D-MDH was constructed successfully. High homology (98%) of nucleotide sequence was revealed between the cloned MDH and the corresponding gene. The recombinant protein showed a high expression level when induced with 1 mM IPTG at 37° C for 4 h. SDS-PAGE analysis showed that the recombinant MDH protein with the correct molecular weight (about 60 kDa) was expressed in E.coli BL21 (DE3). Western blotting revealed that the purified recombinant protein was specifically recognised by sera from mice infected with whole cell T vaginalis . Conclusions A prokaryotic expression system of T vaginalis Malate dehydrogenase gene has been established successfully. The immunogenicity of the recombinant protein has been tested. The present study shows that the recombinant MDH is specific and suitable for use as an antigen for detecting anti- Trichomonas vaginalis IgG antibodies. Our work has established a good foundation for future studies on T vaginalis vaccine construction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.014
Threshold uncertainty score0.990

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.254
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

Explore more

Same venueSexually Transmitted InfectionsSame topicReproductive tract infections researchFrench-language works237,207