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S05.4 Integrating Antimicrobial Susceptibility Monitoring in<i>Neisseria Gonorrhoeae</i>to Broader AMR Agenda

2013· article· en· W2326384023 on OpenAlexaff
Massimo Ghidinelli, Pilar Ramón-Pardo, J A Dillon, Patricia Galarza

Bibliographic record

VenueSexually Transmitted Infections · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicBacterial Infections and Vaccines
Canadian institutionsUniversity of Saskatchewan
Fundersnot available
KeywordsNeisseria gonorrhoeaeMedicineCefiximeAntibiotic resistancePenicillinSpectinomycinLatin AmericansAction planGonorrheaCeftriaxoneEnvironmental healthAntibioticsMicrobiologyVirologyBiologyPolitical science

Abstract

fetched live from OpenAlex

Background Based upon the strategies of the WHO “Global action plan to control the spread and impact of antimicrobial resistance inNeisseria gonorrhoeae”,a plan was developed and implemented to align GASP related activities within the broader agenda of the Antimicrobial Resistance Latin-America Network. Spite of the achievements of GASP in the last decades, there was a need to increase the number of countries and institutions collaborating inN. gonorrhoeaesusceptibility surveillance. In order to achieve this, a comprehensive plan to strengthen the capacity of the Latin-America National Reference Laboratories (NRL) to conduct AMR surveillance in a systematic and regular manner to ensure the early detection of resistantN. gonorroheaewas implemented. Methods After a number of communications and training activities with the NRL,N. gonorrhoeaesusceptibility 2010 data were collected through a questionnaire sent to the National Reference Laboratories in Latin America. Data included country, number of isolated tested, and percentage of resistance to cefixime, ceftriaxone, ciprofloxacin, spectinomycin, penicillin, and tetracycline. Results From 21 Latin American countries integrating the network, 8 (38%) provide data. None of them detected decreased susceptibility to ceftriaxone; resistance to ciproloxacine ranked from 0% to 83%; penicillin from 6 to 78%; no resistance to spectinomycin; resistance to tetracyline from 27 to 83%. Conclusions The NRL demonstrated certain capacity and commitment to collect, analyse, and report data on N. gonorrhoeae susceptibility, however, this should be strengthned and expanded to more countries in the Region. Broad differences among countries were observed, specially on the susceptibility to ciprofloxacine and penicillin. Some challenges were identified, such the lack of a system for referral of specimens at national and regional level. This effort should be continued, emphasising the importance of periodicity on data collection, analysis and dissemination.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.012
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.019
Threshold uncertainty score0.101

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.012
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0030.001
Open science0.0010.003
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0190.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.265
Teacher spread0.249 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2013
Admission routes1
Has abstractyes

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