MétaCan
Menu
← Back to cohort

Multi-color Immunofluorescence Procedure for Rapid Identification of MHC Expression in Human Skeletal Muscle

2011· article· en· W2327641304 on OpenAlexaff
Darin Bloemberg, Joe Quadrilatero

Bibliographic record

VenueMedicine & Science in Sports & Exercise · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMuscle Physiology and Disorders
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsMyosinSkeletal muscleImmunofluorescencePopulationMolecular biologyGene isoformStainingAntibodyBiochemistryImmunoperoxidaseBiologyChemistryMonoclonal antibodyEndocrinologyGeneImmunologyGeneticsMedicine

Abstract

fetched live from OpenAlex

We have previously outlined an immunofluorescence staining protocol for evaluating the fiber type composition of rat and mouse skeletal muscles. The main advantage of this protocol compared to typical myosin ATPase and immunoperoxidase procedures is that multiple myosin heavy chain (MHC) isoforms can be identified on a single cross-section, eliminating the need for multiple incubations. Additionally, detection of MHC expression directly allows for more accurate fiber type identification as differential pH-dependant inactivation of myosin ATPase has been noted across species. However, antibody cross-reactivity with human muscle must also be considered. PURPOSE: To examine the effectiveness of a rapid immunofluorescence fiber-typing procedure on human skeletal muscle. METHODS: Cross-sections of vastus lateralis muscle from eight subjects were incubated with antibodies against MHCI (BA-F8), IIa (SC-71 or 2F7), and IIx (6H1). An additional antibody, specific for all MHC isoforms except IIx (BF-35) was also used. Fiber-type specific oxidative and glycolytic capacity was measured by metabolic enzyme activity staining for succinate dehydrogenase (SDH) and glycerophosphate dehydrogenase (GPD), respectively. RESULTS: Fibers demonstrating strong reactivity with BA-F8 were classified as type I (48.9%). A considerable number of fibers stained intensely for SC-71 and 2F7 and were classified as type IIA (42.8%). A very small subset of fibers stained intermediate for both BA-F8 and SC-71 and were classified as type I/IIA (0.1%). A population of fibers displayed reactivity against 6H1; however, this population also showed intermediate staining for both MHCIIa antibodies. These fibers were identified either as pure type IIX based on their non-reactivity with BF-35 (5.6%), or as type IIAX hybrid fibers based on intermediate staining for both 6H1 and BF-35 (2.6%). Type I fibers were observed as being most oxidative and type IIX fibers as being most glycolytic, with hybrid fibers displaying enzyme activity between their respective pure counterparts. CONCLUSIONS: These results suggest that a multi-color approach using three commercially available antibodies simultaneously is effective for identifying both pure and hybrid fibers in human muscle.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.009
Threshold uncertainty score0.028

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0090.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.286
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

Explore more

Same venueMedicine & Science in Sports & Exercise→Same topicMuscle Physiology and Disorders→French-language works237,207→