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Record W2335358367 · doi:10.3899/jrheum.141069

Something Old, Something New: Biomarkers in Rheumatoid Arthritis

2014· letter· en· W2335358367 on OpenAlexvenueno aff
Federico Pratesi, Paola Migliorini

Bibliographic record

VenueThe Journal of Rheumatology · 2014
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
Topic14-3-3 protein interactions
Canadian institutionsnot available
Fundersnot available
KeywordsRheumatoid arthritisMedicineGene isoformArthritisPsoriatic arthritisImmunologyOsteoarthritisInternal medicinePathologyBiologyGene

Abstract

fetched live from OpenAlex

In this issue of The Journal , Maksymowych, et al 1 propose the detection of the protein 14-3-3η as a novel tool for the diagnosis of rheumatoid arthritis (RA). The protein 14-3-3η belongs to a family of phosphoserine/phosphothreonine–recognition proteins that regulate the activity of several different ligands in various signaling pathways. The expression of these proteins is controlled at the genomic level and post-translationally; a large body of evidence supports the hypothesis that their abnormal expression and/or interaction with targets contributes to a large number of human diseases2. The isoform η is among the most highly induced of these proteins in activated B cells where, by interacting with activation-induced cytidine deaminase, it regulates class-switch recombination3. It is the only isoform that is detectable in increased amounts in microparticles from systemic lupus erythematosus sera4 and in synovial fluids from patients with RA5. Maksymowych, et al 1 studied the serum levels of 14-3-3η in 2 cohorts of patients with RA, one with early RA and one with established RA, who were being treated with disease-modifying antirheumatic drugs (DMARD) but not biologicals. Normal healthy subjects and patients affected by osteoarthritis, chronic arthritis [psoriatic arthritis (PsA), spondyloarthritis, gout], connective tissue disorders, and other inflammatory conditions served as controls. The levels of 14-3-3η could discriminate patients with RA from healthy controls and disease controls with high sensitivity and specificity (77% and 92.5% in established RA, 64% and 92.6% in early RA). Moreover, the levels of 14-3-3η were higher in RA patients with higher C-reactive protein and 28-joint Disease Activity Score levels1 and in those showing radiographic progression6. These data, together with the observed downregulation by anti-tumor necrosis factor treatment, suggest that protein levels reflect ongoing articular damage. It is of interest to note that not … Address correspondence to Dr. P. Migliorini, Clinical Immunology and Allergy Unit, Department of Clinical and Experimental Medicine, University of Pisa, Via Roma 67, 56126 Pisa, Italy. E-mail: paola.migliorini{at}med.unipi.it

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.015
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.024
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.015
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0010.001
Science and technology studies0.0020.004
Scholarly communication0.0030.006
Open science0.0020.001
Research integrity0.0240.025
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.257
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2014
Admission routes1
Has abstractyes

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