MétaCan
Menu
Back to cohort
Record W2341542952 · doi:10.5818/1529-9651-26.1-2.46

An Overview of Reptile Fungal Pathogens in the Genera Nannizziopsis, Paranannizziopsis, and Ophidiomyces

2016· article· en· W2341542952 on OpenAlex
Jean A. Paré, Lynne Sigler

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of Herpetological Medicine and Surgery · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicTurtle Biology and Conservation
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsBiologyFungal diseaseMicrobiologyZoology

Abstract

fetched live from OpenAlex

Abstract Two recent molecular analyses of morphologically similar fungal isolates formerly grouped under the appellation “ Chrysosporium anamorph of Nannizziopsis vriesii (CANV) complex” led to major taxonomic revisions and revealed new insights into the biology of these reptile pathogens. All CANV-complex isolates differed from N. vriesii and were assigned to 16 species, either within Nannizziopsis or within the new genera Paranannizziopsis and Ophidiomyces , and 14 of these species were newly described. From these revisions, a trend in host specificity clearly emerged that was not previously apparent. Nannizziopsis now includes nine species associated with chamaeleonid, gekkonid, cordylid, teiid, agamid, and iguanid lizards; crocodiles; and human hosts. Paranannizziopsis includes four species that infect squamates and tuataras. Ophidiomyces , with the single species Ophidiomyces ophiodiicola (formerly Chrysosporium ophiodiicola ), is only associated with terrestrial or semiaquatic snakes. Nannizziopsi guarroi (formerly Chrysosporium guarroi ) is the main causal agent of yellow fungus disease in captive bearded dragons ( Pogona vitticeps ), and O. ophiodiicola is the cause of mycoses in captive snakes and of snake fungal disease, an emergent global threat to populations of endangered wild snakes. Histopathology, polymerase chain reaction assays, and culture are crucial for confirming a diagnosis of fungal infection in reptiles; however, because fungal identification based on morphologic and physiologic features alone is difficult, sequencing should be sought to speciate reptile fungal isolates. Information gathered from PCR assays and molecular speciation will help in outlining pathogenic potential and contagion risks associated with each of these newly recognized fungal species and allow for a more comprehensive understanding of the ecology, distribution, and host range of these pathogens.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.052
Threshold uncertainty score0.324

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.089
GPT teacher head0.310
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it