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Record W2341987519 · doi:10.1371/journal.pone.0215221

Reporting preclinical anesthesia study (REPEAT): Evaluating the quality of reporting in the preclinical anesthesiology literature

2019· review· en· W2341987519 on OpenAlexaff
Dean Fergusson, Marc T. Avey, Carly C. Barron, Mathew Bocock, Kristen E. Biefer, Sylvain Boet, Stephane L. Bourque, Isidora Conic, Kai Chen, Yuan Dong, Grace Fox, Ronald B. George, Neil M. Goldenberg, Ferrante S. Gragasin, Prathiba Harsha, Patrick Jiho Hong, Tyler E. James, Sarah Larrigan, Jenna MacNeil, Courtney A. Manuel, Sarah Maximos, C. David Mazer, Rohan Mittal, Ryan McGinn, Long Hoai Nguyen, Abhilasha Patel, Philippe Richebé, Tarit Saha, Benjamin E. Steinberg, Sonja D. Sampson, Duncan J. Stewart, Summer Syed, Kimberly Vella, Neil Wesch, Manoj M. Lalu

Bibliographic record

VenuePLoS ONE · 2019
Typereview
Languageen
FieldVeterinary
TopicAnimal testing and alternatives
Canadian institutionsMemorial University of NewfoundlandUniversity of TorontoDalhousie UniversityUniversité de MontréalUniversity of AlbertaMcMaster UniversityQueen's UniversityOttawa HospitalUniversity of Ottawa
FundersNational Institutes of Health
KeywordsMedicineAnesthesiologyBlindingMEDLINEPreclinical researchFamily medicineMedical physicsClinical trialAnesthesiaInternal medicine

Abstract

fetched live from OpenAlex

Poor reporting quality may contribute to irreproducibility of results and failed 'bench-to-bedside' translation. Consequently, guidelines have been developed to improve the complete and transparent reporting of in vivo preclinical studies. To examine the impact of such guidelines on core methodological and analytical reporting items in the preclinical anesthesiology literature, we sampled a cohort of studies. Preclinical in vivo studies published in Anesthesiology, Anesthesia & Analgesia, Anaesthesia, and the British Journal of Anaesthesia (2008-2009, 2014-2016) were identified. Data was extracted independently and in duplicate. Reporting completeness was assessed using the National Institutes of Health Principles and Guidelines for Reporting Preclinical Research. Risk ratios were used for comparative analyses. Of 7615 screened articles, 604 met our inclusion criteria and included experiments reporting on 52 490 animals. The most common topic of investigation was pain and analgesia (30%), rodents were most frequently used (77%), and studies were most commonly conducted in the United States (36%). Use of preclinical reporting guidelines was listed in 10% of applicable articles. A minority of studies fully reported on replicates (0.3%), randomization (10%), blinding (12%), sample-size estimation (3%), and inclusion/exclusion criteria (5%). Statistics were well reported (81%). Comparative analysis demonstrated few differences in reporting rigor between journals, including those that endorsed reporting guidelines. Principal items of study design were infrequently reported, with few differences between journals. Methods to improve implementation and adherence to community-based reporting guidelines may be necessary to increase transparent and consistent reporting in the preclinical anesthesiology literature.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.716
metaresearch head score (Gemma)0.874
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reporting · Consensus signal: Reporting
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.284
Threshold uncertainty score0.350

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7160.874
Meta-epidemiology (narrow)0.0030.003
Meta-epidemiology (broad)0.0060.008
Bibliometrics0.0300.025
Science and technology studies0.0040.008
Scholarly communication0.0110.011
Open science0.0070.010
Research integrity0.0050.004
Insufficient payload (model declined to judge)0.0050.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.845
GPT teacher head0.612
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designObservational
DomainReporting
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations41
Published2019
Admission routes1
Has abstractyes

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