MétaCan
Menu
Back to cohort
Record W2355950377 · doi:10.2310/6650.2005.x0004.465

466 A CLONAL, HIGH-THROUGHPUT ASSAY FOR THE OPTIMIZATION AND CHARACTERIZATION OF MESENCHYMAL STEM CELLS.

2006· article· en· W2355950377 on OpenAlexaff
Aaron W. Joe, Filippo Rossi

Bibliographic record

VenueJournal of Investigative Medicine · 2006
Typearticle
Languageen
FieldMedicine
TopicOrthopaedic implants and arthroplasty
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsMesenchymal stem cellRegenerative medicineStem cellPopulationBiologyCell biologyImmunologyCancer researchMedicine

Abstract

fetched live from OpenAlex

<h3>Introduction</h3> Mesenchymal stem cells (MSCs) can be derived from adult bone marrow and have been shown to differentiate into cells of connective tissues such as ligament, tendon, and bone. Characterization of mesenchymal stem cells (MSCs) has proven difficult because there is little consensus regarding MSC phenotype. In addition, current MSCs are derived from methods that result in heterogeneous MSC populations, making the study of their basic biology difficult. Furthermore, it is unclear whether currently isolated MSCs can provide sustained regeneration and remodeling in vivo. We aim to address these issues in an effort to isolate the ideal MSC for potential clinical use. Specifically, we propose the following: (1) to optimize methods for MSC harvest and expansion and (2) to develop a clonal assay to determine the multipotentiality and expandability of MSC populations in vitro. We aim to develop a high-throughput screen using small volumes in 96- or 384-well plates that will allow direct comparison between various differentiating cells. This project constitutes an important component of an interdisciplinary collaboration that aims to produce a MSC-driven, biomaterials-based, regenerative therapy for revision total hip replacement surgery with severe osteolysis. <h3>Methods</h3> We will develop protocols to enrich for MSCs from primary tissue culture and will assess the clonogenicity of each cell population. Single cells will be isolated, and those that form colonies will be further assessed for mesenchymal multipotentiality by culture in various differentiation media. Cell differentiation will be analyzed by histology and RT-PCR and Western blot analysis of lineage-specific gene products. <h3>Preliminary Results</h3> We have isolated and characterized bulk MSC cultures and have assessed their multipotentiality using an RT-PCR-based differentiation assay. We are currently developing a method for MSC enrichment using cell surface markers and are in the midst of assessing single-cell derived colonies for self-renewal, proliferation, and differentiation along the mesenchymal lineage.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.490
Threshold uncertainty score0.306

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.254
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Investigative MedicineSame topicOrthopaedic implants and arthroplastyFrench-language works237,207