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Record W2364019637

Diagnostic Value of Specific Protein Fragment RV3425 and Fusion Protein CFP10-ESAT6 in Tuberculosis Antibody Detection

2011· article· en· W2364019637 on OpenAlexaff
Jing Wu

Bibliographic record

VenueLetters in Biotechnology · 2011
Typearticle
Languageen
FieldMedicine
TopicTuberculosis Research and Epidemiology
Canadian institutionsCAE (Canada)
Fundersnot available
KeywordsFusion proteinEpitopeMycobacterium tuberculosisRecombinant DNAAntigenAntibodyTuberculosisPlasmidMolecular biologyVirologyBiologyGeneMedicineImmunologyGenetics
DOInot available

Abstract

fetched live from OpenAlex

Objective:Bioinformatics analysis and epitope prediction of Rv3425 in Mycobacterium tuberculosis.Evaluating the diagnostic value of Rv342519-176 recombinant protein and CFP10-ESAT6 fusion protein in tuberculosis(TB).Methods:The gene coding 19~176 amino acid fragment of Rv3425 was amplified from Mycobacterium tuberculosis genome by PCR.Prokaryotic expression vector of Rv342519-176 was constructed and recombinant protein(rRv342519-176) and CFP10-ESAT6 fusion protein(rCFP10-ESAT6) were expressed and purified.Establishing ELISA testing method with recombinant protein and fusion protein for antigen,and assessing the combined value of two proteins in TB-antibody detection.Results:The rRv342519-176 protein fragment with dominant epitope and rCFP10-ESAT6 were expressed effectively in E.coli.The ELISA result showed certain sensibility(39%) and high specificity(97.5%),when rRv342519-167 was antigen for clinical diagnosis in tuberculosis.The sensibility and specificity were respectively 37% and 95%,when rCFP10-ESAT6 was antigen.Furthermore,two proteins conjoint analysis by ELISA showed higher sensibility(57%) and specificity(95%).Conclusion:The epitope of Rv3425 was predicted by bioinformatics.The expressed and purified rRv342519-167 and rCFP10-ESAT6 had a certain complementary antigen in TB-antibody detection,and provided a reference with improving the diagnostic sensitivity in joint diagnostic antigen with keeping high specificity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.271
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

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Same venueLetters in BiotechnologySame topicTuberculosis Research and EpidemiologyFrench-language works237,207