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Record W2367688071

Establishment of RT PCR Method for Diagnosing Porcine Reproductive and Respiratory Syndrome

2000· article· en· W2367688071 on OpenAlexaboutno aff
Lou Gao

Bibliographic record

VenueZhongguo shouyi xuebao · 2000
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicAnimal Virus Infections Studies
Canadian institutionsnot available
Fundersnot available
KeywordsPorcine reproductive and respiratory syndrome virusBiologyAgarose gel electrophoresisVirologyPrimer (cosmetics)Molecular biologyPolymerase chain reactionRNAGeneRNA extractionVirusReal-time polymerase chain reactionReverse transcriptaseReverse transcription polymerase chain reactionArterivirusGene expressionGeneticsCoronavirus disease 2019 (COVID-19)
DOInot available

Abstract

fetched live from OpenAlex

One set of oligonucleotide primer was designed according to the sequence of the nucleocapsid protein gene of Quebec reference strain IAF exp91 of porcine reproductive and respiratory syndrome virus (PRRSV). The primers were used in reverse transcription and polymerase chain reaction (RT PCR) experiments for detection of viral genomic RNA from either infected HS 2H cells or tissues of domestic naturally infected pigs. The primers could amplify sequences from the American and European strains of PRRSV. When analyzed by agarose gel electrophoresis, the resulting bands displayed differences in electrophoretic mobilities due to the absence of 36 nucleotides in the European strain, thus allowing its differentiation from the American strain. No amplification was observed when RNA was extracted from either uninfected HS 2H cells or other porcine viruses. The sensitivity of the RT PCR for detection of PRRSV was measured to be a 50% tissue culture infective dose of 10. All of the detected domestic clinical samples were positive by the RT PCR and their strains belonged to the American type in gene level. It was first established that the direct extraction of the RNA from tissues and organs of naturally infected pigs and cell cultures was used in detection of RNA of PRRSV by RT PCR. The RT PCR is proved to be a specific, sensitive, rapid and simple method and can be used in research of epidemiology and early clinical diagnosis of PRRS in molecular level.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.685
Threshold uncertainty score0.411

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.283
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2000
Admission routes1
Has abstractyes

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